Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.83□□□□□ -1.32
SUMO3P55854 NDUFA3P1-201ENST00000588007 252 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.83□□□□□ -1.32
SUMO3P55854 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 AC004852.1-201ENST00000605206 154 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 OR6L2P-201ENST00000608207 925 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.83□□□□□ -1.32
SUMO3P55854 AC084824.5-201ENST00000612009 413 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC097641.3-201ENST00000613523 464 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 uc_338.33-201ENST00000614988 170 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.83□□□□□ -1.32
SUMO3P55854 SNORA43.5-201ENST00000631270 138 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 AC126773.4-201ENST00000612545 3043 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC018992.1-201ENST00000523778 2149 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 SALL1P1-201ENST00000438101 3837 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.83□□□□□ -1.32
SUMO3P55854 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 VEZF1P1-201ENST00000423931 1541 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 AL049634.1-201ENST00000453770 1720 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 AC010886.1-201ENST00000437380 2869 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 PPIAP22-201ENST00000358455 498 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 RNU4-39P-201ENST00000362455 127 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 U3.1-201ENST00000362500 215 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 AC020983.1-201ENST00000417063 543 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 PRPS1P2-201ENST00000430496 937 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 VN1R48P-201ENST00000448149 1036 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 OR52I1-201ENST00000450052 1050 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 TCEAL4P1-201ENST00000453620 588 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 RN7SL213P-201ENST00000463482 317 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 EIF3KP1-201ENST00000513279 656 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC009879.1-201ENST00000520029 839 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC084251.1-201ENST00000521867 382 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.82□□□□□ -1.32
SUMO3P55854 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC105275.2-201ENST00000567907 711 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC027281.1-201ENST00000574178 758 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 MIR4262-201ENST00000578394 54 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 RPS28P1-201ENST00000604589 187 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 U47924.1-201ENST00000606539 434 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC010320.5-201ENST00000619124 676 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC110769.3-201ENST00000624567 1173 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 AC106858.1-201ENST00000637497 429 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.82□□□□□ -1.32
SUMO3P55854 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 KYNUP1-201ENST00000466683 1406 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SUMO3P55854 AL157831.2-201ENST00000564681 3095 ntBASIC6.82□□□□□ -1.32
SUMO3P55854 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
SUMO3P55854 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SUMO3P55854 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
SUMO3P55854 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 AL445250.1-203ENST00000641829 1535 ntBASIC6.81□□□□□ -1.32
SUMO3P55854 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.81□□□□□ -1.32
SUMO3P55854 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SUMO3P55854 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SUMO3P55854 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.81□□□□□ -1.32
SUMO3P55854 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms