Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 LARP1P1-201ENST00000407692 292 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 RNA5SP280-201ENST00000411230 115 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 MED28P7-201ENST00000456611 530 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 BX323845.2-201ENST00000458382 234 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC079193.1-201ENST00000460497 588 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 RN7SL267P-201ENST00000485107 261 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 RN7SL868P-201ENST00000485915 303 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 ST13P6-201ENST00000522430 1102 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC005753.1-201ENST00000623837 618 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC093616.1-201ENST00000427434 2095 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HLA-DOAP06340 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC025040.2-201ENST00000558657 1852 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC090774.4-201ENST00000578888 1372 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC051619.3-201ENST00000560646 2426 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 RNU6-1055P-201ENST00000391085 107 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 CNN3P1-201ENST00000401596 935 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL121578.1-201ENST00000428051 892 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 BX005266.3-201ENST00000443013 1075 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 PSPC1P2-201ENST00000455130 225 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC117500.1-201ENST00000497352 755 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC100854.1-201ENST00000520351 341 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 OR5M6P-201ENST00000530227 937 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 HMGN1P26-201ENST00000558737 303 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 WDR45BP1-201ENST00000583470 1029 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 CR382285.1-202ENST00000604687 547 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC139795.3-201ENST00000606358 541 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 U91328.4-201ENST00000608919 517 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL161420.1-201ENST00000619393 264 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL109924.4-201ENST00000623089 670 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 OR52K3P-202ENST00000641797 1729 ntBASIC8.51□□□□□ -1.05
HLA-DOAP06340 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HLA-DOAP06340 CREM-216ENST00000429130 1476 ntTSL 5 BASIC8.51□□□□□ -1.05
HLA-DOAP06340 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 AL353763.2-201ENST00000623489 1903 ntBASIC8.5□□□□□ -1.05
HLA-DOAP06340 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
HLA-DOAP06340 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HLA-DOAP06340 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms