Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC079416.3-201ENST00000624479 549 ntBASIC8.04□□□□□ -1.12
PHC3Q8NDX5 AC114324.1-201ENST00000504077 3152 ntBASIC8.04□□□□□ -1.12
PHC3Q8NDX5 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 AC025040.2-201ENST00000558657 1852 ntBASIC8.04□□□□□ -1.12
PHC3Q8NDX5 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
PHC3Q8NDX5 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ABCA11P-202ENST00000504019 2110 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC008537.3-201ENST00000623128 1881 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 RNA5SP426-201ENST00000362901 121 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 RANP4-201ENST00000413361 655 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC003080.1-201ENST00000413552 767 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 DHFRP2-201ENST00000414224 547 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 UBE2V1P9-201ENST00000414760 368 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC002367.1-201ENST00000416765 405 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC019181.1-201ENST00000417151 310 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 FAF2P1-201ENST00000429974 1298 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC140479.1-201ENST00000440423 337 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL355355.1-201ENST00000442900 793 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 TXNP3-201ENST00000454560 301 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC087672.1-201ENST00000479876 766 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 EIF1P7-201ENST00000487533 337 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 KRT18P54-201ENST00000513396 748 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 NOP56P3-201ENST00000549457 385 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 DPPA3P2-201ENST00000553589 478 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC093826.2-201ENST00000579042 108 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 BNIP3P17-201ENST00000605448 595 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC080013.6-201ENST00000606185 215 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 RNU4-5P-201ENST00000607255 135 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC092954.1-201ENST00000609121 445 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC021755.4-201ENST00000616620 456 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 RN7SL113P-201ENST00000619959 299 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC083865.1-201ENST00000636634 831 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 AL359694.2-201ENST00000567753 1615 ntBASIC8.03□□□□□ -1.12
PHC3Q8NDX5 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
PHC3Q8NDX5 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
PHC3Q8NDX5 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RAD1P1-201ENST00000231383 813 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms