| MUC1 | P15941 | IFT88-201 | ENST00000319980 | 3091 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | MELK-208 | ENST00000536987 | 2125 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ANGEL2-201 | ENST00000360506 | 4323 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | MAPRE2-203 | ENST00000436190 | 4323 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | OR4D10-201 | ENST00000530162 | 2482 nt | APPRIS P1 BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ST8SIA5-203 | ENST00000538168 | 13761 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ZNF699-201 | ENST00000308650 | 2094 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | FGG-204 | ENST00000405164 | 1539 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | NEK5-201 | ENST00000355568 | 2918 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL606490.2-201 | ENST00000457562 | 1330 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | GRIA3-204 | ENST00000541091 | 2740 nt | APPRIS P5 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | STT3A-214 | ENST00000531491 | 2160 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | MCTP2-208 | ENST00000557742 | 1957 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ARPP21-221 | ENST00000444190 | 3182 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ZNF407-202 | ENST00000309902 | 5595 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CNTNAP2-203 | ENST00000463592 | 6076 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | LUZP1-203 | ENST00000418342 | 8421 nt | APPRIS P1 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL138847.1-201 | ENST00000258651 | 546 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RGS8-203 | ENST00000367557 | 859 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | NR1I3-203 | ENST00000367981 | 1076 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | NDUFV2-202 | ENST00000400033 | 942 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC023141.10-201 | ENST00000415634 | 200 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC012560.1-202 | ENST00000421324 | 535 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC009495.3-201 | ENST00000425688 | 779 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | KRTAP3-4P-201 | ENST00000430780 | 280 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | Z83313.1-201 | ENST00000433780 | 718 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | LIN28AP2-201 | ENST00000445283 | 458 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ATP5G1P6-201 | ENST00000451206 | 412 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ZNF32-AS1-201 | ENST00000453284 | 434 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | TCEAL4P1-201 | ENST00000453620 | 588 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | HNRNPDLP2-201 | ENST00000455248 | 751 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RPL7P17-201 | ENST00000470927 | 724 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RN7SL153P-201 | ENST00000486501 | 292 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ZSWIM7-209 | ENST00000486655 | 726 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SUMO2P7-201 | ENST00000511179 | 285 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | UTP14C-201 | ENST00000521776 | 5529 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AP000893.2-201 | ENST00000527550 | 433 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC008013.2-201 | ENST00000537555 | 348 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CLEC4E-206 | ENST00000545274 | 730 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC013489.1-201 | ENST00000561140 | 598 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | TMX3-204 | ENST00000562706 | 937 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AP003071.2-201 | ENST00000562772 | 990 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC136624.3-201 | ENST00000571660 | 567 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AP001120.4-201 | ENST00000590231 | 108 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC004839.1-201 | ENST00000610269 | 501 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | Metazoa_SRP.167-201 | ENST00000614947 | 260 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CEBPZ-201 | ENST00000234170 | 3463 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC019270.1-201 | ENST00000523495 | 3488 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SPATA31A1-201 | ENST00000377647 | 4256 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SPATA31A7-206 | ENST00000619167 | 4256 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | C11orf72-201 | ENST00000333139 | 2431 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | DIO2-AS1-201 | ENST00000553979 | 1597 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC242022.1-201 | ENST00000638002 | 1565 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | LINC01772-201 | ENST00000457898 | 3245 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | MAPK10-383 | ENST00000642032 | 3390 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | VEZF1P1-201 | ENST00000423931 | 1541 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CDY1-201 | ENST00000306609 | 2321 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CDY1B-201 | ENST00000306882 | 2321 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | CDKAL1-204 | ENST00000613575 | 1673 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| MUC1 | P15941 | IL31RA-207 | ENST00000490985 | 2414 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC021231.1-201 | ENST00000559246 | 1342 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | GSDMB-202 | ENST00000360317 | 1468 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | KCNJ15-220 | ENST00000612702 | 3046 nt | APPRIS P1 TSL 4 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | DACH2-207 | ENST00000510272 | 1764 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | HHLA2-201 | ENST00000357759 | 2666 nt | APPRIS P3 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | LYSMD3-203 | ENST00000500869 | 3863 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | BDNF-209 | ENST00000420794 | 4176 nt | APPRIS P1 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ANKRD30A-205 | ENST00000611781 | 4474 nt | APPRIS ALT2 TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | INTS2-207 | ENST00000617492 | 5805 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | G6PC-201 | ENST00000253801 | 3096 nt | APPRIS P1 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | OR52N5-201 | ENST00000317093 | 1034 nt | APPRIS P1 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SNORD46-201 | ENST00000364043 | 104 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | NXT2-204 | ENST00000372107 | 937 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SNORA68-201 | ENST00000384437 | 133 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | TRBV9-201 | ENST00000390363 | 390 nt | APPRIS P1 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | IGHV4-34-201 | ENST00000390616 | 400 nt | APPRIS P1 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | MORF4L1P5-201 | ENST00000433352 | 961 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | OR5G3-201 | ENST00000435756 | 929 nt | APPRIS P1 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC098483.1-201 | ENST00000438623 | 955 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | SYNJ2-IT1-201 | ENST00000442328 | 599 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC114488.2-222 | ENST00000445166 | 362 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL358612.1-201 | ENST00000452911 | 481 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AF015262.1-201 | ENST00000455028 | 698 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL050331.2-201 | ENST00000457319 | 421 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | KYNUP1-201 | ENST00000466683 | 1406 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RN7SL815P-201 | ENST00000470970 | 290 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RN7SL751P-201 | ENST00000473281 | 284 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | RN7SL445P-201 | ENST00000495609 | 293 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC108120.1-201 | ENST00000506543 | 991 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC097375.1-201 | ENST00000507949 | 488 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC233724.10-201 | ENST00000510454 | 409 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AC091182.2-201 | ENST00000520431 | 578 nt | TSL 4 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | TPT1-AS1-214 | ENST00000521507 | 665 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | FXYD5-207 | ENST00000541435 | 898 nt | APPRIS P2 TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | PRR13-203 | ENST00000546581 | 810 nt | APPRIS ALT2 TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | DDIT3-204 | ENST00000551116 | 1067 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL049869.1-201 | ENST00000556933 | 1402 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | AL118558.1-201 | ENST00000557551 | 566 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | ARL6IP1-204 | ENST00000562819 | 578 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| MUC1 | P15941 | EIF4EBP2P2-201 | ENST00000563883 | 333 nt | BASIC | 6.29 | □□□□□ -1.4 | | |