Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC123912.3-201ENST00000600907 1367 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 RN7SKP55-201ENST00000364888 307 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 RPL12P1-201ENST00000374520 498 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 PDCL3P5-201ENST00000398028 722 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 FTLP17-201ENST00000432567 525 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 OR7E7P-201ENST00000455678 1012 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AP005597.2-201ENST00000526238 341 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC027796.1-201ENST00000575593 512 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 MIR5682-201ENST00000584864 76 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC087894.3-201ENST00000623682 349 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AL353622.1-201ENST00000604716 1945 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 SALL1P1-201ENST00000438101 3837 ntBASIC8.54□□□□□ -1.04
HLA-DOAP06340 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HLA-DOAP06340 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.54□□□□□ -1.04
HLA-DOAP06340 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 RNA5SP472-201ENST00000363868 119 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 RN7SKP268-201ENST00000411107 316 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC114402.2-201ENST00000432760 643 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC104698.1-201ENST00000435671 276 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC234771.3-201ENST00000454984 622 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 RN7SL325P-201ENST00000460434 283 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC117395.2-201ENST00000463122 1128 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 GLYATL1P4-201ENST00000529326 906 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC100832.2-201ENST00000582080 776 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AL390882.1-201ENST00000618821 594 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 TNFSF15-201ENST00000374044 2789 ntBASIC8.53□□□□□ -1.04
HLA-DOAP06340 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HLA-DOAP06340 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
HLA-DOAP06340 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
HLA-DOAP06340 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HLA-DOAP06340 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HLA-DOAP06340 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.04
HLA-DOAP06340 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 MIR187-201ENST00000385062 109 ntBASIC8.52□□□□□ -1.05
HLA-DOAP06340 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HLA-DOAP06340 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms