Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL451054.1-201ENST00000621770 772 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 WBP11P1-201ENST00000562560 1931 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AC011008.2-201ENST00000624866 3352 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL590065.1-201ENST00000603371 4774 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 AL162171.3-201ENST00000617439 3178 ntBASIC6.87□□□□□ -1.31
SNX18Q96RF0 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.87□□□□□ -1.31
SNX18Q96RF0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SNX18Q96RF0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CDYLP1-201ENST00000419017 1458 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 TRIM51FP-201ENST00000526452 1353 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AP000568.1-201ENST00000282964 442 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 RNU1-21P-201ENST00000363327 163 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 SNORA10-201ENST00000384084 133 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AL358942.1-201ENST00000418595 1178 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 RAC1P4-201ENST00000419413 579 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AL590682.1-201ENST00000437248 344 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC068491.1-201ENST00000449539 1241 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 AL031736.1-201ENST00000449688 618 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 RPL5P12-201ENST00000477071 851 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 RN7SL201P-201ENST00000482306 296 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 SCARNA20.1-201ENST00000516009 138 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 RNU6-467P-201ENST00000517027 110 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 GZMB-205ENST00000526004 819 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC009269.2-201ENST00000559892 474 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC020910.4-201ENST00000612269 540 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC245028.3-201ENST00000618197 285 ntBASIC6.86□□□□□ -1.31
SNX18Q96RF0 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
SNX18Q96RF0 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SNX18Q96RF0 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.85□□□□□ -1.31
SNX18Q96RF0 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
SNX18Q96RF0 CREM-218ENST00000460270 1416 ntTSL 2 BASIC6.85□□□□□ -1.31
SNX18Q96RF0 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
SNX18Q96RF0 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.85□□□□□ -1.31
SNX18Q96RF0 MFSD8-227ENST00000641393 4069 ntBASIC6.85□□□□□ -1.31
SNX18Q96RF0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SNX18Q96RF0 MIR106B-201ENST00000385301 82 ntBASIC6.85□□□□□ -1.31
SNX18Q96RF0 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms