Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DDX50P1-201ENST00000438163 2400 ntBASIC8.89□□□□□ -0.99
CHMP4CQ96CF2 AC092111.1-201ENST00000618256 3358 ntBASIC8.89□□□□□ -0.99
CHMP4CQ96CF2 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 OR52K3P-202ENST00000641797 1729 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 MIR575-201ENST00000385013 94 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 GAS8-AS1-201ENST00000408886 435 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 VDAC1P2-201ENST00000423609 850 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 RNF11P2-201ENST00000427702 440 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 RN7SL233P-201ENST00000469988 277 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 TUBBP11-201ENST00000472255 252 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 RN7SL869P-201ENST00000497032 300 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC012181.2-201ENST00000570210 699 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC024451.4-201ENST00000602578 752 ntBASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHMP4CQ96CF2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AC092570.2-201ENST00000452117 1143 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AC079944.1-201ENST00000485426 495 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 GCSHP1-201ENST00000512554 484 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 EIF3KP1-201ENST00000513279 656 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 OR7E96P-201ENST00000530816 976 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AL049869.4-201ENST00000555669 178 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AL035417.2-201ENST00000603887 796 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AL512413.1-201ENST00000606489 382 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 AP003072.5-201ENST00000623872 773 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 FGL2-202ENST00000637771 989 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 TMEM75-201ENST00000624314 2165 ntBASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
CHMP4CQ96CF2 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms