Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7□□□□□ -1.29
SKP1P63208 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 AC016559.1-201ENST00000511420 199 ntBASIC7□□□□□ -1.29
SKP1P63208 AC111000.1-201ENST00000514545 713 ntBASIC7□□□□□ -1.29
SKP1P63208 AC117383.2-201ENST00000514722 322 ntBASIC7□□□□□ -1.29
SKP1P63208 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7□□□□□ -1.29
SKP1P63208 ATP5J2P4-201ENST00000538774 267 ntBASIC7□□□□□ -1.29
SKP1P63208 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7□□□□□ -1.29
SKP1P63208 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7□□□□□ -1.29
SKP1P63208 pRNA.9-201ENST00000618609 89 ntBASIC7□□□□□ -1.29
SKP1P63208 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC7□□□□□ -1.29
SKP1P63208 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7□□□□□ -1.29
SKP1P63208 AC018558.4-201ENST00000622153 281 ntBASIC7□□□□□ -1.29
SKP1P63208 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7□□□□□ -1.29
SKP1P63208 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 AL445250.1-203ENST00000641829 1535 ntBASIC7□□□□□ -1.29
SKP1P63208 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SKP1P63208 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SKP1P63208 TRIM64EP-201ENST00000531233 1307 ntBASIC7□□□□□ -1.29
SKP1P63208 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SKP1P63208 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SKP1P63208 AC008555.1-201ENST00000561778 2757 ntBASIC6.99□□□□□ -1.29
SKP1P63208 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SKP1P63208 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 AL355862.1-201ENST00000412705 353 ntBASIC6.99□□□□□ -1.29
SKP1P63208 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.99□□□□□ -1.29
SKP1P63208 AL590240.2-201ENST00000413370 894 ntBASIC6.99□□□□□ -1.29
SKP1P63208 AF274573.1-201ENST00000430535 494 ntBASIC6.99□□□□□ -1.29
SKP1P63208 RPL5P4-201ENST00000434805 886 ntBASIC6.99□□□□□ -1.29
SKP1P63208 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.99□□□□□ -1.29
SKP1P63208 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.99□□□□□ -1.29
SKP1P63208 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 RN7SL791P-201ENST00000467868 295 ntBASIC6.99□□□□□ -1.29
SKP1P63208 BMS1P15-201ENST00000554269 1141 ntBASIC6.99□□□□□ -1.29
SKP1P63208 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.99□□□□□ -1.29
SKP1P63208 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.99□□□□□ -1.29
SKP1P63208 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 uc_338.21-201ENST00000622458 147 ntBASIC6.99□□□□□ -1.29
SKP1P63208 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.99□□□□□ -1.29
SKP1P63208 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
SKP1P63208 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SKP1P63208 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.99□□□□□ -1.29
SKP1P63208 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SKP1P63208 AC069222.1-201ENST00000608028 3360 ntBASIC6.99□□□□□ -1.29
SKP1P63208 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SKP1P63208 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.98□□□□□ -1.29
SKP1P63208 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SKP1P63208 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SKP1P63208 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.98□□□□□ -1.29
SKP1P63208 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.98□□□□□ -1.29
SKP1P63208 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SKP1P63208 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SKP1P63208 AL117339.4-201ENST00000608335 7063 ntBASIC6.98□□□□□ -1.29
SKP1P63208 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SKP1P63208 RNU1-38P-201ENST00000362817 144 ntBASIC6.98□□□□□ -1.29
SKP1P63208 RN7SKP174-201ENST00000363803 330 ntBASIC6.98□□□□□ -1.29
SKP1P63208 RNA5SP396-201ENST00000364834 120 ntBASIC6.98□□□□□ -1.29
SKP1P63208 ARMCX7P-201ENST00000372828 562 ntBASIC6.98□□□□□ -1.29
SKP1P63208 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SKP1P63208 LARP1P1-201ENST00000407692 292 ntBASIC6.98□□□□□ -1.29
SKP1P63208 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.98□□□□□ -1.29
SKP1P63208 NFU1P1-201ENST00000413128 774 ntBASIC6.98□□□□□ -1.29
SKP1P63208 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.98□□□□□ -1.29
SKP1P63208 AC009413.1-201ENST00000414823 399 ntBASIC6.98□□□□□ -1.29
SKP1P63208 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.98□□□□□ -1.29
SKP1P63208 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.98□□□□□ -1.29
SKP1P63208 FDPSP1-201ENST00000424976 1071 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms