Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC6.16□□□□□ -1.42
AP3S2P59780 OR5S1P-201ENST00000453063 951 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 PSPC1P2-201ENST00000455130 225 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC002075.1-201ENST00000457396 676 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC084878.1-201ENST00000480555 648 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
AP3S2P59780 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC6.16□□□□□ -1.42
AP3S2P59780 SNX18P27-201ENST00000523611 779 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 GZMB-205ENST00000526004 819 ntTSL 3 BASIC6.16□□□□□ -1.42
AP3S2P59780 AP003532.1-201ENST00000529936 310 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.16□□□□□ -1.42
AP3S2P59780 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC048344.2-201ENST00000547280 147 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 FXNP1-201ENST00000555153 337 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 MIR4682-201ENST00000580643 80 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC6.16□□□□□ -1.42
AP3S2P59780 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 AL445647.2-201ENST00000615170 130 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC6.16□□□□□ -1.42
AP3S2P59780 AC129908.1-201ENST00000624553 648 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC6.16□□□□□ -1.42
AP3S2P59780 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 BRD7P1-201ENST00000557705 1915 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AL117378.2-201ENST00000622916 1337 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AP3S2P59780 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.16□□□□□ -1.42
AP3S2P59780 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AP3S2P59780 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.16□□□□□ -1.42
AP3S2P59780 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.16□□□□□ -1.42
AP3S2P59780 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AP3S2P59780 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 AC137056.2-201ENST00000624055 1958 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
AP3S2P59780 SNORA3.1-201ENST00000408166 111 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 RN7SKP270-201ENST00000411297 312 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 AC244505.2-201ENST00000435089 759 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 HMGN1P6-201ENST00000438508 291 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC6.15□□□□□ -1.42
AP3S2P59780 RN7SL395P-201ENST00000462960 291 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 AC009078.1-201ENST00000474978 783 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.15□□□□□ -1.42
AP3S2P59780 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC6.15□□□□□ -1.42
AP3S2P59780 SNRPCP14-201ENST00000524498 205 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.15□□□□□ -1.42
AP3S2P59780 AC016144.1-201ENST00000548175 1087 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 AL109628.2-201ENST00000554037 201 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.15□□□□□ -1.42
AP3S2P59780 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 AL645949.1-202ENST00000600073 242 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.15□□□□□ -1.42
AP3S2P59780 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 AC074029.3-201ENST00000618623 312 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 RN7SL680P-201ENST00000620379 299 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
AP3S2P59780 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 AC022743.1-201ENST00000624990 664 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP3S2P59780 AC241377.2-202ENST00000636462 997 ntBASIC6.15□□□□□ -1.42
AP3S2P59780 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC6.15□□□□□ -1.42
AP3S2P59780 DNM1P47-203ENST00000571780 12667 ntBASIC6.15□□□□□ -1.43
AP3S2P59780 NIPA2P4-201ENST00000523928 1341 ntBASIC6.15□□□□□ -1.43
AP3S2P59780 MFSD1P1-201ENST00000576210 1327 ntBASIC6.15□□□□□ -1.43
AP3S2P59780 AL139384.2-201ENST00000613809 3590 ntBASIC6.15□□□□□ -1.43
AP3S2P59780 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 ZNF826P-204ENST00000597334 1446 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC6.15□□□□□ -1.43
AP3S2P59780 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AP3S2P59780 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
AP3S2P59780 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.14□□□□□ -1.43
AP3S2P59780 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.14□□□□□ -1.43
AP3S2P59780 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.14□□□□□ -1.43
AP3S2P59780 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.14□□□□□ -1.43
AP3S2P59780 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP3S2P59780 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP3S2P59780 AC105114.1-201ENST00000624795 1862 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms