Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.97□□□□□ -1.13
UBE4BO95155 BX119917.1-201ENST00000432517 502 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 AC105052.2-201ENST00000434317 794 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
UBE4BO95155 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.97□□□□□ -1.13
UBE4BO95155 EAF2-202ENST00000451944 960 ntTSL 2 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC079944.1-201ENST00000485426 495 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
UBE4BO95155 HSPE1P10-201ENST00000508631 558 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 AC008417.1-201ENST00000510014 565 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 LINC01085-203ENST00000511195 326 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.97□□□□□ -1.13
UBE4BO95155 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.97□□□□□ -1.13
UBE4BO95155 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.97□□□□□ -1.13
UBE4BO95155 FRG2IP-201ENST00000563581 781 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 EEF1B2P1-201ENST00000567221 672 ntBASIC7.97□□□□□ -1.13
UBE4BO95155 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.97□□□□□ -1.13
UBE4BO95155 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
UBE4BO95155 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.97□□□□□ -1.13
UBE4BO95155 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.96□□□□□ -1.13
UBE4BO95155 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 AC061975.5-201ENST00000584928 1441 ntBASIC7.96□□□□□ -1.13
UBE4BO95155 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
UBE4BO95155 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.96□□□□□ -1.13
UBE4BO95155 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
UBE4BO95155 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
UBE4BO95155 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
UBE4BO95155 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.96□□□□□ -1.14
UBE4BO95155 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
UBE4BO95155 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 AC112225.1-201ENST00000508230 297 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 OR4N3P-201ENST00000559395 818 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.96□□□□□ -1.14
UBE4BO95155 NDUFA3P4-201ENST00000560814 250 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 MIR3135A-201ENST00000578460 77 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.96□□□□□ -1.14
UBE4BO95155 AC135068.4-201ENST00000622949 925 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 AC073488.7-201ENST00000633785 778 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 AL596275.2-203ENST00000641951 371 ntBASIC7.96□□□□□ -1.14
UBE4BO95155 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.96□□□□□ -1.14
UBE4BO95155 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.96□□□□□ -1.14
UBE4BO95155 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
UBE4BO95155 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
UBE4BO95155 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
UBE4BO95155 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
UBE4BO95155 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.95□□□□□ -1.14
UBE4BO95155 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
UBE4BO95155 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
UBE4BO95155 AC090771.1-201ENST00000585803 1618 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.95□□□□□ -1.14
UBE4BO95155 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
UBE4BO95155 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
UBE4BO95155 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 AL645936.2-201ENST00000430565 928 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 AL161626.1-201ENST00000441480 490 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.95□□□□□ -1.14
UBE4BO95155 RN7SL145P-201ENST00000469955 296 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 RN7SL88P-201ENST00000480166 299 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 RN7SL797P-201ENST00000486314 297 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 CHCHD2P7-201ENST00000508008 452 ntBASIC7.95□□□□□ -1.14
UBE4BO95155 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC7.95□□□□□ -1.14
UBE4BO95155 AC068790.1-201ENST00000536166 355 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms