Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB3Q9Y5E6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 KRT18P68-201ENST00000392293 1000 ntBASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB3Q9Y5E6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 RPS2P52-201ENST00000469610 820 ntBASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 AC142381.4-202ENST00000563973 229 ntBASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB3Q9Y5E6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 AL512408.1-201ENST00000569378 2000 ntBASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 AL158047.1-201ENST00000445918 881 ntBASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHB3Q9Y5E6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB3Q9Y5E6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB3Q9Y5E6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms