Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COPS3Q9UNS2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COPS3Q9UNS2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 CDV3P1-201ENST00000471403 739 ntBASIC17.8■□□□□ 0.44
COPS3Q9UNS2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 UBE2DNL-204ENST00000602536 740 ntBASIC17.8■□□□□ 0.44
COPS3Q9UNS2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COPS3Q9UNS2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.79■□□□□ 0.44
COPS3Q9UNS2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.78■□□□□ 0.44
COPS3Q9UNS2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms