Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.39■■□□□ 1.01
CISHQ9NSE2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CISHQ9NSE2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CISHQ9NSE2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.39■■□□□ 1.01
CISHQ9NSE2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.39■■□□□ 1.01
CISHQ9NSE2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CISHQ9NSE2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.39■■□□□ 1.01
CISHQ9NSE2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CISHQ9NSE2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 PNMA6B-201ENST00000538162 1200 ntBASIC21.38■■□□□ 1.01
CISHQ9NSE2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.38■■□□□ 1.01
CISHQ9NSE2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CISHQ9NSE2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.37■■□□□ 1.01
CISHQ9NSE2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CISHQ9NSE2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CISHQ9NSE2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CISHQ9NSE2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 AL390719.1-204ENST00000412397 1219 ntBASIC21.36■■□□□ 1.01
CISHQ9NSE2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CISHQ9NSE2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.36■■□□□ 1.01
CISHQ9NSE2 KRT18P6-201ENST00000555540 1265 ntBASIC21.36■■□□□ 1.01
CISHQ9NSE2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.36■■□□□ 1.01
CISHQ9NSE2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CISHQ9NSE2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CISHQ9NSE2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms