Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 KRT8P36-201ENST00000489121 1440 ntBASIC20.66■□□□□ 0.9
VPS45Q9NRW7 AC087633.2-202ENST00000565166 1439 ntBASIC20.66■□□□□ 0.9
VPS45Q9NRW7 CYP21A1P-202ENST00000354927 1481 ntBASIC20.66■□□□□ 0.9
VPS45Q9NRW7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 AL157384.1-201ENST00000445995 2473 ntBASIC20.66■□□□□ 0.9
VPS45Q9NRW7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
VPS45Q9NRW7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 KRT18P21-201ENST00000515767 1272 ntBASIC20.65■□□□□ 0.9
VPS45Q9NRW7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS45Q9NRW7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.9
VPS45Q9NRW7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS45Q9NRW7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS45Q9NRW7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 BX088651.1-201ENST00000540551 451 ntBASIC20.64■□□□□ 0.89
VPS45Q9NRW7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS45Q9NRW7 AC092720.2-201ENST00000602388 1665 ntBASIC20.64■□□□□ 0.89
VPS45Q9NRW7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.63■□□□□ 0.89
VPS45Q9NRW7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 AC069544.1-201ENST00000609399 999 ntBASIC20.63■□□□□ 0.89
VPS45Q9NRW7 LINC01006-201ENST00000333319 2292 ntBASIC20.63■□□□□ 0.89
VPS45Q9NRW7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
VPS45Q9NRW7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 KRT17P2-201ENST00000300992 1314 ntBASIC20.62■□□□□ 0.89
VPS45Q9NRW7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 MCRIP2P1-201ENST00000394346 511 ntBASIC20.62■□□□□ 0.89
VPS45Q9NRW7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.62■□□□□ 0.89
VPS45Q9NRW7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 SOX15-203ENST00000570788 1093 ntBASIC20.62■□□□□ 0.89
VPS45Q9NRW7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
VPS45Q9NRW7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS45Q9NRW7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS45Q9NRW7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms