Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 KRT18P61-201ENST00000585825 1298 ntBASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 AC010536.3-201ENST00000620306 533 ntBASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
POLR2J3Q9H1A7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 BX119927.1-201ENST00000636596 1552 ntBASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 TMEM179-206ENST00000616017 1645 ntBASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR2J3Q9H1A7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 AC034268.1-201ENST00000441047 882 ntBASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 AC013268.1-206ENST00000638368 961 ntBASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 AC112229.1-201ENST00000639295 961 ntBASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
POLR2J3Q9H1A7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 NTF6G-201ENST00000591094 616 ntBASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 CYP21A1P-202ENST00000354927 1481 ntBASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR2J3Q9H1A7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AC100791.3-201ENST00000617619 330 ntBASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AC018445.3-201ENST00000624177 1945 ntBASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR2J3Q9H1A7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms