Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 NOC2LP2-201ENST00000407594 1944 ntBASIC16.2■□□□□ 0.18
NKX6-2Q9C056 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.2■□□□□ 0.18
NKX6-2Q9C056 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
NKX6-2Q9C056 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 YBX1P4-201ENST00000392794 808 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AC241377.3-202ENST00000626088 1088 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AC241585.3-202ENST00000628937 1088 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AC245100.8-202ENST00000629247 1058 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AC104581.1-202ENST00000635932 2618 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 AL139384.1-201ENST00000612143 3047 ntBASIC16.19■□□□□ 0.18
NKX6-2Q9C056 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX6-2Q9C056 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 TNRC18P3-201ENST00000441896 2691 ntBASIC16.18■□□□□ 0.18
NKX6-2Q9C056 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 AC004987.1-201ENST00000428627 508 ntBASIC16.18■□□□□ 0.18
NKX6-2Q9C056 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 ABHD17AP5-201ENST00000580133 923 ntBASIC16.18■□□□□ 0.18
NKX6-2Q9C056 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 AC121338.2-201ENST00000622535 1744 ntBASIC16.18■□□□□ 0.18
NKX6-2Q9C056 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX6-2Q9C056 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
NKX6-2Q9C056 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms