Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 FAAHP1-202ENST00000446499 1238 ntBASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AC009078.2-202ENST00000463353 338 ntBASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 COX11P1-201ENST00000489116 835 ntBASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3Q9BZ76 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 KRT18P13-201ENST00000400056 1290 ntBASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 CKBP1-201ENST00000565489 1086 ntBASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 PRELID1P1-202ENST00000567272 903 ntBASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CNTNAP3Q9BZ76 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 KRT16P1-201ENST00000399124 1418 ntBASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 HMGA1P5-201ENST00000412453 271 ntBASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 KSR1P1-201ENST00000446298 240 ntBASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3Q9BZ76 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 AC008622.2-201ENST00000617006 1229 ntBASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 AC233723.2-201ENST00000623798 2106 ntBASIC19.09■□□□□ 0.65
CNTNAP3Q9BZ76 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 AC022898.2-201ENST00000616822 1312 ntBASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3Q9BZ76 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 HMGN1P19-201ENST00000436976 333 ntBASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 AP005242.2-201ENST00000580065 1175 ntBASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 AC130371.2-201ENST00000619443 611 ntBASIC19.08■□□□□ 0.64
CNTNAP3Q9BZ76 AC011558.1-201ENST00000623459 338 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms