Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 PGM5P4-201ENST00000421970 445 ntBASIC11.88□□□□□ -0.51
LIMD2Q9BT23 PTPA-214ENST00000423100 988 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 ZNRF2P3-201ENST00000424200 374 ntBASIC11.88□□□□□ -0.51
LIMD2Q9BT23 AC097381.1-201ENST00000429019 1296 ntBASIC11.88□□□□□ -0.51
LIMD2Q9BT23 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 FAM21FP-204ENST00000608637 956 ntBASIC11.88□□□□□ -0.51
LIMD2Q9BT23 AC243732.1-201ENST00000612648 864 ntBASIC11.88□□□□□ -0.51
LIMD2Q9BT23 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 STAC-204ENST00000457375 1366 ntTSL 2 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LIMD2Q9BT23 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 AL157384.1-201ENST00000445995 2473 ntBASIC11.87□□□□□ -0.51
LIMD2Q9BT23 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LIMD2Q9BT23 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LIMD2Q9BT23 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms