Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXC2Q99958 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXC2Q99958 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 AC128688.1-201ENST00000487626 519 ntBASIC16.91■□□□□ 0.3
FOXC2Q99958 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXC2Q99958 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXC2Q99958 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXC2Q99958 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXC2Q99958 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXC2Q99958 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FOXC2Q99958 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 TSPY14P-201ENST00000303979 915 ntBASIC16.9■□□□□ 0.3
FOXC2Q99958 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXC2Q99958 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXC2Q99958 KRT18P48-201ENST00000434763 852 ntBASIC16.9■□□□□ 0.3
FOXC2Q99958 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXC2Q99958 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
FOXC2Q99958 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXC2Q99958 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FOXC2Q99958 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FOXC2Q99958 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXC2Q99958 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXC2Q99958 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXC2Q99958 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
FOXC2Q99958 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXC2Q99958 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXC2Q99958 AC124283.5-201ENST00000624661 1809 ntBASIC16.89■□□□□ 0.29
FOXC2Q99958 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXC2Q99958 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXC2Q99958 AP005242.2-201ENST00000580065 1175 ntBASIC16.89■□□□□ 0.29
FOXC2Q99958 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FOXC2Q99958 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
FOXC2Q99958 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
FOXC2Q99958 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXC2Q99958 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 FSCN1P1-201ENST00000568912 1481 ntBASIC16.88■□□□□ 0.29
FOXC2Q99958 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
FOXC2Q99958 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXC2Q99958 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXC2Q99958 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXC2Q99958 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXC2Q99958 AL031985.4-201ENST00000642138 673 ntBASIC16.88■□□□□ 0.29
FOXC2Q99958 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXC2Q99958 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXC2Q99958 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FOXC2Q99958 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXC2Q99958 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXC2Q99958 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXC2Q99958 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXC2Q99958 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
FOXC2Q99958 FAM8A6P-201ENST00000407496 1135 ntBASIC16.87■□□□□ 0.29
FOXC2Q99958 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms