Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS2Q99743 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NPAS2Q99743 CNN2P6-201ENST00000439038 900 ntBASIC19.55■□□□□ 0.72
NPAS2Q99743 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.55■□□□□ 0.72
NPAS2Q99743 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS2Q99743 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
NPAS2Q99743 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS2Q99743 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS2Q99743 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS2Q99743 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.54■□□□□ 0.72
NPAS2Q99743 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NPAS2Q99743 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS2Q99743 NCF1B-203ENST00000435988 1254 ntBASIC19.54■□□□□ 0.72
NPAS2Q99743 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.54■□□□□ 0.72
NPAS2Q99743 AC104771.1-201ENST00000603335 964 ntBASIC19.54■□□□□ 0.72
NPAS2Q99743 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NPAS2Q99743 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAS2Q99743 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NPAS2Q99743 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.54■□□□□ 0.72
NPAS2Q99743 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPAS2Q99743 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NPAS2Q99743 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPAS2Q99743 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NPAS2Q99743 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.53■□□□□ 0.72
NPAS2Q99743 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 AC010536.3-201ENST00000620306 533 ntBASIC19.53■□□□□ 0.72
NPAS2Q99743 AC231657.2-201ENST00000624556 255 ntBASIC19.53■□□□□ 0.72
NPAS2Q99743 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.53■□□□□ 0.72
NPAS2Q99743 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NPAS2Q99743 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPAS2Q99743 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
NPAS2Q99743 BX323043.1-201ENST00000641006 1765 ntBASIC19.52■□□□□ 0.72
NPAS2Q99743 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS2Q99743 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NPAS2Q99743 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS2Q99743 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.52■□□□□ 0.72
NPAS2Q99743 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 SLC7A5P1-201ENST00000568957 537 ntBASIC19.52■□□□□ 0.72
NPAS2Q99743 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.52■□□□□ 0.72
NPAS2Q99743 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS2Q99743 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS2Q99743 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.52■□□□□ 0.72
NPAS2Q99743 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
NPAS2Q99743 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS2Q99743 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS2Q99743 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS2Q99743 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NPAS2Q99743 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS2Q99743 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPAS2Q99743 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPAS2Q99743 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS2Q99743 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS2Q99743 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms