Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AC231657.2-201ENST00000624556 255 ntBASIC16.51■□□□□ 0.23
S1PR3Q99500 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
S1PR3Q99500 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
S1PR3Q99500 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 SMG8-203ENST00000578922 2178 ntBASIC16.5■□□□□ 0.23
S1PR3Q99500 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
S1PR3Q99500 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
S1PR3Q99500 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.5■□□□□ 0.23
S1PR3Q99500 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.5■□□□□ 0.23
S1PR3Q99500 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.5■□□□□ 0.23
S1PR3Q99500 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.5■□□□□ 0.23
S1PR3Q99500 AC008694.1-202ENST00000636953 945 ntBASIC16.5■□□□□ 0.23
S1PR3Q99500 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.5■□□□□ 0.23
S1PR3Q99500 AFG3L1P-217ENST00000557444 2447 ntBASIC16.5■□□□□ 0.23
S1PR3Q99500 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
S1PR3Q99500 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.5■□□□□ 0.23
S1PR3Q99500 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
S1PR3Q99500 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
S1PR3Q99500 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
S1PR3Q99500 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
S1PR3Q99500 DPP3P2-201ENST00000416030 1696 ntBASIC16.5■□□□□ 0.23
S1PR3Q99500 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.49■□□□□ 0.23
S1PR3Q99500 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.49■□□□□ 0.23
S1PR3Q99500 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 CYP21A1P-202ENST00000354927 1481 ntBASIC16.49■□□□□ 0.23
S1PR3Q99500 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.49■□□□□ 0.23
S1PR3Q99500 AC007322.1-201ENST00000426983 750 ntBASIC16.49■□□□□ 0.23
S1PR3Q99500 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.49■□□□□ 0.23
S1PR3Q99500 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.49■□□□□ 0.23
S1PR3Q99500 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.49■□□□□ 0.23
S1PR3Q99500 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.49■□□□□ 0.23
S1PR3Q99500 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.49■□□□□ 0.23
S1PR3Q99500 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
S1PR3Q99500 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
S1PR3Q99500 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
S1PR3Q99500 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
S1PR3Q99500 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 CNN2P6-201ENST00000439038 900 ntBASIC16.48■□□□□ 0.23
S1PR3Q99500 RARRES2P4-201ENST00000514074 484 ntBASIC16.48■□□□□ 0.23
S1PR3Q99500 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 AC069236.1-201ENST00000604339 616 ntBASIC16.48■□□□□ 0.23
S1PR3Q99500 AC100791.3-201ENST00000617619 330 ntBASIC16.48■□□□□ 0.23
S1PR3Q99500 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 AC073111.5-205ENST00000641717 521 ntBASIC16.48■□□□□ 0.23
S1PR3Q99500 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.48■□□□□ 0.23
S1PR3Q99500 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
S1PR3Q99500 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms