Protein–RNA interactions for Protein: Q99222

AFI1, ARF3-interacting protein 1, yeastyeast

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFI1Q99222 YDR344CYDR344C 444 nt0.86□□□□□ -2.27
AFI1Q99222 BFR2YDR299W 1605 nt0.86□□□□□ -2.27
AFI1Q99222 RPL26BYGR034W 384 nt0.85□□□□□ -2.27
AFI1Q99222 RPS27BYHR021C 249 nt0.85□□□□□ -2.27
AFI1Q99222 COG8YML071C 1824 nt0.85□□□□□ -2.27
AFI1Q99222 tR(ACG)Q2tR(ACG)Q2 74 nt0.84□□□□□ -2.27
AFI1Q99222 YNL211CYNL211C 261 nt0.84□□□□□ -2.27
AFI1Q99222 RPS30BYOR182C 192 nt0.84□□□□□ -2.27
AFI1Q99222 snR36snR36 182 nt0.84□□□□□ -2.27
AFI1Q99222 YFL063WYFL063W 456 nt0.83□□□□□ -2.28
AFI1Q99222 INA22YIR024C 651 nt0.83□□□□□ -2.28
AFI1Q99222 CSE2YNR010W 450 nt0.83□□□□□ -2.28
AFI1Q99222 YOR218CYOR218C 420 nt0.83□□□□□ -2.28
AFI1Q99222 YGL149WYGL149W 306 nt0.82□□□□□ -2.28
AFI1Q99222 YIL032CYIL032C 357 nt0.82□□□□□ -2.28
AFI1Q99222 YKL118WYKL118W 312 nt0.82□□□□□ -2.28
AFI1Q99222 SGF11YPL047W 300 nt0.82□□□□□ -2.28
AFI1Q99222 ASE1YOR058C 2658 nt0.82□□□□□ -2.28
AFI1Q99222 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
AFI1Q99222 VIK1YPL253C 1944 nt0.81□□□□□ -2.28
AFI1Q99222 NHP2YDL208W 471 nt0.81□□□□□ -2.28
AFI1Q99222 YHR063W-AYHR063W-A 336 nt0.81□□□□□ -2.28
AFI1Q99222 YIL142C-AYIL142C-A 333 nt0.81□□□□□ -2.28
AFI1Q99222 UBP3YER151C 2739 nt0.8□□□□□ -2.28
AFI1Q99222 RPL39YJL189W 156 nt0.8□□□□□ -2.28
AFI1Q99222 snR60snR60 104 nt0.79□□□□□ -2.28
AFI1Q99222 YMR193C-AYMR193C-A 387 nt0.79□□□□□ -2.28
AFI1Q99222 SEC8YPR055W 3198 nt0.78□□□□□ -2.28
AFI1Q99222 YFL032WYFL032W 321 nt0.78□□□□□ -2.28
AFI1Q99222 RKR1YMR247C 4689 nt0.77□□□□□ -2.29
AFI1Q99222 YKL136WYKL136W 399 nt0.77□□□□□ -2.29
AFI1Q99222 YAL067W-AYAL067W-A 228 nt0.77□□□□□ -2.29
AFI1Q99222 NPR2YEL062W 1848 nt0.77□□□□□ -2.29
AFI1Q99222 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
AFI1Q99222 YFR012W-AYFR012W-A 87 nt0.76□□□□□ -2.29
AFI1Q99222 CHS6YJL099W 2241 nt0.75□□□□□ -2.29
AFI1Q99222 YER097WYER097W 330 nt0.75□□□□□ -2.29
AFI1Q99222 HAL9YOL089C 3093 nt0.74□□□□□ -2.29
AFI1Q99222 YDR413CYDR413C 576 nt0.74□□□□□ -2.29
AFI1Q99222 YLR399W-AYLR399W-A 105 nt0.74□□□□□ -2.29
AFI1Q99222 STE5YDR103W 2754 nt0.73□□□□□ -2.29
AFI1Q99222 YJL026C-AYJL026C-A 222 nt0.73□□□□□ -2.29
AFI1Q99222 YNL028WYNL028W 318 nt0.73□□□□□ -2.29
AFI1Q99222 YPR160W-AYPR160W-A 81 nt0.73□□□□□ -2.29
AFI1Q99222 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
AFI1Q99222 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
AFI1Q99222 YMR307C-AYMR307C-A 195 nt0.72□□□□□ -2.29
AFI1Q99222 BEM3YPL115C 3387 nt0.71□□□□□ -2.3
AFI1Q99222 FYV10YIL097W 1551 nt0.71□□□□□ -2.3
AFI1Q99222 YDR354C-AYDR354C-A 144 nt0.71□□□□□ -2.3
AFI1Q99222 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
AFI1Q99222 YCR018C-AYCR018C-A 255 nt0.69□□□□□ -2.3
AFI1Q99222 YDL185C-AYDL185C-A 228 nt0.69□□□□□ -2.3
AFI1Q99222 YJL197C-AYJL197C-A 282 nt0.69□□□□□ -2.3
AFI1Q99222 snR190snR190 190 nt0.69□□□□□ -2.3
AFI1Q99222 YML002WYML002W 2214 nt0.68□□□□□ -2.3
AFI1Q99222 YEL020C-BYEL020C-B 198 nt0.68□□□□□ -2.3
AFI1Q99222 COX5BYIL111W 456 nt0.67□□□□□ -2.3
AFI1Q99222 PRP5YBR237W 2550 nt0.67□□□□□ -2.3
AFI1Q99222 YDR524W-CYDR524W-C 90 nt0.66□□□□□ -2.3
AFI1Q99222 YMR160WYMR160W 2451 nt0.65□□□□□ -2.3
AFI1Q99222 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
AFI1Q99222 YLR120W-AYLR120W-A 102 nt0.64□□□□□ -2.31
AFI1Q99222 OST4YDL232W 111 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)BtF(GAA)B 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)FtF(GAA)F 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)GtF(GAA)G 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)H1tF(GAA)H1 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)H2tF(GAA)H2 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)MtF(GAA)M 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)P1tF(GAA)P1 73 nt0.63□□□□□ -2.31
AFI1Q99222 tF(GAA)P2tF(GAA)P2 73 nt0.63□□□□□ -2.31
AFI1Q99222 YJL127W-AYJL127W-A 117 nt0.63□□□□□ -2.31
AFI1Q99222 YMR031W-AYMR031W-A 327 nt0.63□□□□□ -2.31
AFI1Q99222 YSP1YHR155W 3687 nt0.62□□□□□ -2.31
AFI1Q99222 YLR282CYLR282C 342 nt0.62□□□□□ -2.31
AFI1Q99222 YOR008C-AYOR008C-A 225 nt0.62□□□□□ -2.31
AFI1Q99222 RAD61YDR014W 1944 nt0.62□□□□□ -2.31
AFI1Q99222 YOR015WYOR015W 360 nt0.61□□□□□ -2.31
AFI1Q99222 YOR072W-BYOR072W-B 162 nt0.61□□□□□ -2.31
AFI1Q99222 PRP42YDR235W 1635 nt0.6□□□□□ -2.31
AFI1Q99222 IQG1YPL242C 4488 nt0.6□□□□□ -2.31
AFI1Q99222 YLL019W-AYLL019W-A 93 nt0.6□□□□□ -2.31
AFI1Q99222 YIL134C-AYIL134C-A 204 nt0.59□□□□□ -2.31
AFI1Q99222 YKL100W-AYKL100W-A 90 nt0.59□□□□□ -2.31
AFI1Q99222 COY1YKL179C 2040 nt0.59□□□□□ -2.32
AFI1Q99222 YMR172C-AYMR172C-A 384 nt0.58□□□□□ -2.32
AFI1Q99222 MLP1YKR095W 5628 nt0.58□□□□□ -2.32
AFI1Q99222 YCR022CYCR022C 345 nt0.57□□□□□ -2.32
AFI1Q99222 YGL123C-AYGL123C-A 231 nt0.56□□□□□ -2.32
AFI1Q99222 BLI1YKL061W 342 nt0.56□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms