Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TWNKQ96RR1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.29■■□□□ 1
TWNKQ96RR1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 AC124283.5-201ENST00000624661 1809 ntBASIC21.29■■□□□ 1
TWNKQ96RR1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.29■■□□□ 1
TWNKQ96RR1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TWNKQ96RR1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.29■■□□□ 1
TWNKQ96RR1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TWNKQ96RR1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TWNKQ96RR1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.28■■□□□ 1
TWNKQ96RR1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.28■■□□□ 1
TWNKQ96RR1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TWNKQ96RR1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.28■■□□□ 1
TWNKQ96RR1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.28■■□□□ 1
TWNKQ96RR1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 ESRRAP1-201ENST00000400596 1257 ntBASIC21.28■■□□□ 1
TWNKQ96RR1 AL390719.1-204ENST00000412397 1219 ntBASIC21.28■■□□□ 1
TWNKQ96RR1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TWNKQ96RR1 AP003097.1-201ENST00000530657 1135 ntBASIC21.28■■□□□ 1
TWNKQ96RR1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.28■■□□□ 1
TWNKQ96RR1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
TWNKQ96RR1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.28■■□□□ 1
TWNKQ96RR1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
TWNKQ96RR1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TWNKQ96RR1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TWNKQ96RR1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.27■■□□□ 1
TWNKQ96RR1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.27■■□□□ 1
TWNKQ96RR1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 HLA-G-202ENST00000376815 851 ntBASIC21.27■■□□□ 1
TWNKQ96RR1 HLA-G-203ENST00000376818 1127 ntBASIC21.27■■□□□ 1
TWNKQ96RR1 AC026366.1-201ENST00000488803 879 ntBASIC21.27■■□□□ 1
TWNKQ96RR1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.27■■□□□ 1
TWNKQ96RR1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.27■■□□□ 1
TWNKQ96RR1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.27■■□□□ 1
TWNKQ96RR1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.27■■□□□ 1
TWNKQ96RR1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.27■■□□□ 1
TWNKQ96RR1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.27■■□□□ 1
TWNKQ96RR1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TWNKQ96RR1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TWNKQ96RR1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.27■□□□□ 0.99
TWNKQ96RR1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.27■□□□□ 0.99
TWNKQ96RR1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 AC008687.6-201ENST00000596318 630 ntBASIC21.26■□□□□ 0.99
TWNKQ96RR1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.26■□□□□ 0.99
TWNKQ96RR1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TWNKQ96RR1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms