Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 RARRES2P4-201ENST00000514074 484 ntBASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 AL512408.1-201ENST00000569378 2000 ntBASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 AC016405.3-201ENST00000607710 860 ntBASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H2AAQ96QV6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H2AAQ96QV6 AC068338.2-201ENST00000563278 1430 ntBASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 AC100791.3-201ENST00000617619 330 ntBASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H2AAQ96QV6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 DPP3P2-201ENST00000416030 1696 ntBASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H2AAQ96QV6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 CNN2P6-201ENST00000439038 900 ntBASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H2AAQ96QV6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms