Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF560Q96MR9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 C1QBPP2-201ENST00000528754 825 ntBASIC21.42■■□□□ 1.02
ZNF560Q96MR9 PRKY-204ENST00000533551 1019 ntBASIC21.42■■□□□ 1.02
ZNF560Q96MR9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 MTDHP1-201ENST00000605323 784 ntBASIC21.42■■□□□ 1.02
ZNF560Q96MR9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF560Q96MR9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AL158047.1-201ENST00000445918 881 ntBASIC21.41■■□□□ 1.02
ZNF560Q96MR9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AL121829.2-201ENST00000620908 328 ntBASIC21.41■■□□□ 1.02
ZNF560Q96MR9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AC073314.1-201ENST00000568729 2216 ntBASIC21.41■■□□□ 1.02
ZNF560Q96MR9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AP005212.1-201ENST00000581547 1997 ntBASIC21.41■■□□□ 1.02
ZNF560Q96MR9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.41■■□□□ 1.02
ZNF560Q96MR9 AC124283.5-201ENST00000624661 1809 ntBASIC21.41■■□□□ 1.02
ZNF560Q96MR9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AC239809.2-201ENST00000415381 517 ntBASIC21.4■■□□□ 1.02
ZNF560Q96MR9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AL359736.2-201ENST00000621992 437 ntBASIC21.4■■□□□ 1.02
ZNF560Q96MR9 FAM197Y4-202ENST00000622692 608 ntBASIC21.4■■□□□ 1.02
ZNF560Q96MR9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
ZNF560Q96MR9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF560Q96MR9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF560Q96MR9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.39■■□□□ 1.02
ZNF560Q96MR9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 RPPH1-201ENST00000516869 333 ntBASIC21.39■■□□□ 1.01
ZNF560Q96MR9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF560Q96MR9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms