Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 ID1-201ENST00000376105 1233 ntBASIC18.26■□□□□ 0.51
C3orf49Q96BT1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 AL691432.2-201ENST00000607222 2038 ntBASIC18.26■□□□□ 0.51
C3orf49Q96BT1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C3orf49Q96BT1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 CROCCP5-201ENST00000436658 830 ntBASIC18.25■□□□□ 0.51
C3orf49Q96BT1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C3orf49Q96BT1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 AF201337.1-201ENST00000520239 748 ntBASIC18.24■□□□□ 0.51
C3orf49Q96BT1 AC105036.2-201ENST00000569468 176 ntBASIC18.24■□□□□ 0.51
C3orf49Q96BT1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
C3orf49Q96BT1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 C2orf69P4-201ENST00000565394 541 ntBASIC18.23■□□□□ 0.51
C3orf49Q96BT1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.23■□□□□ 0.51
C3orf49Q96BT1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 MKRN4P-201ENST00000444706 1521 ntBASIC18.23■□□□□ 0.51
C3orf49Q96BT1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
C3orf49Q96BT1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
C3orf49Q96BT1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 AL031963.3-201ENST00000606441 850 ntBASIC18.22■□□□□ 0.51
C3orf49Q96BT1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.22■□□□□ 0.51
C3orf49Q96BT1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
C3orf49Q96BT1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
C3orf49Q96BT1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
C3orf49Q96BT1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C3orf49Q96BT1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms