Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP2A3Q93084 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A3Q93084 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 AC233263.1-201ENST00000578059 224 ntBASIC21.04■□□□□ 0.96
ATP2A3Q93084 AL356652.1-201ENST00000615962 565 ntBASIC21.04■□□□□ 0.96
ATP2A3Q93084 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP2A3Q93084 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.04■□□□□ 0.96
ATP2A3Q93084 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.03■□□□□ 0.96
ATP2A3Q93084 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP2A3Q93084 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP2A3Q93084 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A3Q93084 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
ATP2A3Q93084 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.02■□□□□ 0.95
ATP2A3Q93084 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP2A3Q93084 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A3Q93084 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP2A3Q93084 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A3Q93084 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ATP2A3Q93084 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms