Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NPIPB3Q92617 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 PGM5P4-201ENST00000421970 445 ntBASIC15.77■□□□□ 0.12
NPIPB3Q92617 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 UBE2DNL-204ENST00000602536 740 ntBASIC15.77■□□□□ 0.12
NPIPB3Q92617 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.77■□□□□ 0.12
NPIPB3Q92617 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.77■□□□□ 0.11
NPIPB3Q92617 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NPIPB3Q92617 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
NPIPB3Q92617 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NPIPB3Q92617 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NPIPB3Q92617 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 AC120498.9-201ENST00000339021 3867 ntBASIC15.76■□□□□ 0.11
NPIPB3Q92617 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPB3Q92617 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPB3Q92617 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 AL356652.1-201ENST00000615962 565 ntBASIC15.75■□□□□ 0.11
NPIPB3Q92617 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPB3Q92617 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPB3Q92617 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms