Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC245052.3-201ENST00000450182 901 ntBASIC19.54■□□□□ 0.72
CPSF7Q8N684 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.54■□□□□ 0.72
CPSF7Q8N684 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.54■□□□□ 0.72
CPSF7Q8N684 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
CPSF7Q8N684 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPSF7Q8N684 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 AC116050.2-201ENST00000612102 1779 ntBASIC19.53■□□□□ 0.72
CPSF7Q8N684 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 AC026185.1-201ENST00000445748 174 ntBASIC19.53■□□□□ 0.72
CPSF7Q8N684 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPSF7Q8N684 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.53■□□□□ 0.72
CPSF7Q8N684 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.72
CPSF7Q8N684 KRT16P2-201ENST00000414673 1423 ntBASIC19.52■□□□□ 0.72
CPSF7Q8N684 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.52■□□□□ 0.72
CPSF7Q8N684 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPSF7Q8N684 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPSF7Q8N684 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CPSF7Q8N684 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPSF7Q8N684 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CPSF7Q8N684 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.52■□□□□ 0.71
CPSF7Q8N684 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CPSF7Q8N684 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPSF7Q8N684 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.51■□□□□ 0.71
CPSF7Q8N684 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 BX119927.1-201ENST00000636596 1552 ntBASIC19.5■□□□□ 0.71
CPSF7Q8N684 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CPSF7Q8N684 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CPSF7Q8N684 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.5■□□□□ 0.71
CPSF7Q8N684 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.5■□□□□ 0.71
CPSF7Q8N684 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 AC093484.2-201ENST00000580996 2166 ntBASIC19.5■□□□□ 0.71
CPSF7Q8N684 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPSF7Q8N684 KRT8P36-201ENST00000489121 1440 ntBASIC19.5■□□□□ 0.71
CPSF7Q8N684 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms