Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC116Q8IYX3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 GPX1P1-201ENST00000388829 606 ntBASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 MIPEPP3-201ENST00000412105 444 ntBASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 TCF3P1-201ENST00000423021 1937 ntBASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 PTBP1P-201ENST00000554374 1601 ntBASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC116Q8IYX3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 AFG3L1P-217ENST00000557444 2447 ntBASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC116Q8IYX3 BX119927.1-201ENST00000636596 1552 ntBASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 KRT8P17-201ENST00000453110 1448 ntBASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 AC090192.1-201ENST00000517740 490 ntBASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC116Q8IYX3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 AL691432.2-201ENST00000607222 2038 ntBASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms