Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 MCRIP2P1-201ENST00000394346 511 ntBASIC24.44■■□□□ 1.5
CASC1Q6TDU7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 AC100791.3-201ENST00000617619 330 ntBASIC24.44■■□□□ 1.5
CASC1Q6TDU7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CASC1Q6TDU7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 RARRES2P4-201ENST00000514074 484 ntBASIC24.43■■□□□ 1.5
CASC1Q6TDU7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 IKBKGP1-201ENST00000612193 1073 ntBASIC24.43■■□□□ 1.5
CASC1Q6TDU7 BID-214ENST00000617586 542 ntTSL 5 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CASC1Q6TDU7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 AC011767.1-201ENST00000617410 1153 ntBASIC24.42■■□□□ 1.5
CASC1Q6TDU7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 TMEM179-206ENST00000616017 1645 ntBASIC24.42■■□□□ 1.5
CASC1Q6TDU7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CASC1Q6TDU7 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.42■■□□□ 1.5
CASC1Q6TDU7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 AL691432.2-201ENST00000607222 2038 ntBASIC24.41■■□□□ 1.5
CASC1Q6TDU7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 AC092437.1-201ENST00000624794 1048 ntBASIC24.41■■□□□ 1.5
CASC1Q6TDU7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CASC1Q6TDU7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CASC1Q6TDU7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CASC1Q6TDU7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CASC1Q6TDU7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.39■■□□□ 1.5
CASC1Q6TDU7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CASC1Q6TDU7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms