Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 OR10C1-204ENST00000622521 1039 ntBASIC22.62■■□□□ 1.21
SHC4Q6S5L8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
SHC4Q6S5L8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 KRT17P1-201ENST00000399211 1546 ntBASIC22.61■■□□□ 1.21
SHC4Q6S5L8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHC4Q6S5L8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 AL031963.3-201ENST00000606441 850 ntBASIC22.6■■□□□ 1.21
SHC4Q6S5L8 IKBKGP1-201ENST00000612193 1073 ntBASIC22.6■■□□□ 1.21
SHC4Q6S5L8 AC008694.1-202ENST00000636953 945 ntBASIC22.6■■□□□ 1.21
SHC4Q6S5L8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SHC4Q6S5L8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.59■■□□□ 1.21
SHC4Q6S5L8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 AC005181.1-201ENST00000604782 1256 ntBASIC22.58■■□□□ 1.21
SHC4Q6S5L8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SHC4Q6S5L8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC4Q6S5L8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHC4Q6S5L8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SHC4Q6S5L8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.58■■□□□ 1.2
SHC4Q6S5L8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.57■■□□□ 1.2
SHC4Q6S5L8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 AL512625.2-201ENST00000417533 625 ntBASIC22.57■■□□□ 1.2
SHC4Q6S5L8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHC4Q6S5L8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms