Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 AC010536.3-201ENST00000620306 533 ntBASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRIF1Q5T3J3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 AC007322.4-201ENST00000509611 723 ntBASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRIF1Q5T3J3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRIF1Q5T3J3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 KRT8P17-201ENST00000453110 1448 ntBASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 AC016405.3-201ENST00000607710 860 ntBASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 AL020996.1-203ENST00000536896 2307 ntBASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRIF1Q5T3J3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIF1Q5T3J3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 AP000974.1-201ENST00000623909 2387 ntBASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 RNF165-205ENST00000588679 2904 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms