Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 PTBP1P-201ENST00000554374 1601 ntBASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDLRAP1Q5SW96 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
LDLRAP1Q5SW96 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LDLRAP1Q5SW96 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LDLRAP1Q5SW96 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
LDLRAP1Q5SW96 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
LDLRAP1Q5SW96 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 HLA-G-202ENST00000376815 851 ntBASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 HLA-G-203ENST00000376818 1127 ntBASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 AL390719.1-204ENST00000412397 1219 ntBASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 RNA5SP413-201ENST00000516373 109 ntBASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 PNMA6B-201ENST00000538162 1200 ntBASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.89■□□□□ 0.77
LDLRAP1Q5SW96 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 KRT8P20-201ENST00000423953 1409 ntBASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 AC005829.2-201ENST00000571422 1056 ntBASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 AL031963.3-201ENST00000606441 850 ntBASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LDLRAP1Q5SW96 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 AC007952.6-201ENST00000573168 2673 ntBASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 AC003957.1-201ENST00000625108 2673 ntBASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms