Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH17Q12864 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH17Q12864 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH17Q12864 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH17Q12864 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH17Q12864 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH17Q12864 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH17Q12864 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 KRT8P20-201ENST00000423953 1409 ntBASIC20.23■□□□□ 0.83
CDH17Q12864 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH17Q12864 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH17Q12864 AL031963.3-201ENST00000606441 850 ntBASIC20.23■□□□□ 0.83
CDH17Q12864 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH17Q12864 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH17Q12864 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH17Q12864 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH17Q12864 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH17Q12864 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 C2orf69P4-201ENST00000565394 541 ntBASIC20.22■□□□□ 0.83
CDH17Q12864 AL050303.2-201ENST00000619798 666 ntBASIC20.22■□□□□ 0.83
CDH17Q12864 TMEM179-206ENST00000616017 1645 ntBASIC20.22■□□□□ 0.83
CDH17Q12864 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH17Q12864 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDH17Q12864 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDH17Q12864 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH17Q12864 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH17Q12864 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.22■□□□□ 0.83
CDH17Q12864 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH17Q12864 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH17Q12864 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH17Q12864 AF201337.1-201ENST00000520239 748 ntBASIC20.21■□□□□ 0.83
CDH17Q12864 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CDH17Q12864 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 RAP2CP1-201ENST00000605103 478 ntBASIC20.21■□□□□ 0.83
CDH17Q12864 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH17Q12864 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH17Q12864 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH17Q12864 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH17Q12864 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH17Q12864 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH17Q12864 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH17Q12864 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH17Q12864 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 MIR663A-201ENST00000385250 93 ntBASIC20.2■□□□□ 0.82
CDH17Q12864 LSM12P1-201ENST00000411836 588 ntBASIC20.2■□□□□ 0.82
CDH17Q12864 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 AC105036.2-201ENST00000569468 176 ntBASIC20.2■□□□□ 0.82
CDH17Q12864 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH17Q12864 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH17Q12864 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH17Q12864 MKRN4P-201ENST00000444706 1521 ntBASIC20.2■□□□□ 0.82
CDH17Q12864 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH17Q12864 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDH17Q12864 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH17Q12864 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH17Q12864 KRT16P6-202ENST00000425692 1426 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms