Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 SGF11YPL047W 300 nt-0.28□□□□□ -2.45
RFU1Q08003 YCR018C-AYCR018C-A 255 nt-0.3□□□□□ -2.46
RFU1Q08003 GPI15YNL038W 690 nt-0.3□□□□□ -2.46
RFU1Q08003 Q0255Q0255 1419 nt-0.3□□□□□ -2.46
RFU1Q08003 PRP39YML046W 1890 nt-0.31□□□□□ -2.46
RFU1Q08003 snR8snR8 190 nt-0.31□□□□□ -2.46
RFU1Q08003 YLR287CYLR287C 1068 nt-0.31□□□□□ -2.46
RFU1Q08003 YNL319WYNL319W 441 nt-0.31□□□□□ -2.46
RFU1Q08003 YKL083WYKL083W 615 nt-0.32□□□□□ -2.46
RFU1Q08003 TAR1YLR154W-C 375 nt-0.32□□□□□ -2.46
RFU1Q08003 YMR307C-AYMR307C-A 195 nt-0.32□□□□□ -2.46
RFU1Q08003 YHR131W-AYHR131W-A 246 nt-0.33□□□□□ -2.46
RFU1Q08003 YPR002C-AYPR002C-A 198 nt-0.33□□□□□ -2.46
RFU1Q08003 HMRA2YCR096C 360 nt-0.34□□□□□ -2.46
RFU1Q08003 snR128snR128 126 nt-0.34□□□□□ -2.46
RFU1Q08003 YPL225WYPL225W 441 nt-0.34□□□□□ -2.46
RFU1Q08003 YKL136WYKL136W 399 nt-0.35□□□□□ -2.47
RFU1Q08003 TFB5YDR079C-A 219 nt-0.36□□□□□ -2.47
RFU1Q08003 YEL073CYEL073C 324 nt-0.36□□□□□ -2.47
RFU1Q08003 YLL006W-AYLL006W-A 177 nt-0.36□□□□□ -2.47
RFU1Q08003 YML007C-AYML007C-A 111 nt-0.36□□□□□ -2.47
RFU1Q08003 CSE1YGL238W 2883 nt-0.37□□□□□ -2.47
RFU1Q08003 ZEO1YOL109W 342 nt-0.37□□□□□ -2.47
RFU1Q08003 YOR192C-CYOR192C-C 237 nt-0.37□□□□□ -2.47
RFU1Q08003 YDR210WYDR210W 228 nt-0.38□□□□□ -2.47
RFU1Q08003 FYV7YLR068W 456 nt-0.38□□□□□ -2.47
RFU1Q08003 YPR092WYPR092W 306 nt-0.39□□□□□ -2.47
RFU1Q08003 DIE2YGR227W 1578 nt-0.4□□□□□ -2.47
RFU1Q08003 YDR426CYDR426C 378 nt-0.4□□□□□ -2.47
RFU1Q08003 YGR174W-AYGR174W-A 87 nt-0.4□□□□□ -2.47
RFU1Q08003 YHR125WYHR125W 306 nt-0.4□□□□□ -2.47
RFU1Q08003 YCR022CYCR022C 345 nt-0.41□□□□□ -2.48
RFU1Q08003 SBH2YER019C-A 267 nt-0.41□□□□□ -2.48
RFU1Q08003 PCF11YDR228C 1881 nt-0.41□□□□□ -2.48
RFU1Q08003 YAR047CYAR047C 321 nt-0.42□□□□□ -2.48
RFU1Q08003 YLR334CYLR334C 381 nt-0.42□□□□□ -2.48
RFU1Q08003 UTP8YGR128C 2142 nt-0.43□□□□□ -2.48
RFU1Q08003 YER084W-AYER084W-A 513 nt-0.43□□□□□ -2.48
RFU1Q08003 ECL1YGR146C 636 nt-0.43□□□□□ -2.48
RFU1Q08003 YGR164WYGR164W 336 nt-0.43□□□□□ -2.48
RFU1Q08003 RPS25BYLR333C 327 nt-0.43□□□□□ -2.48
RFU1Q08003 YPL068CYPL068C 882 nt-0.43□□□□□ -2.48
RFU1Q08003 AIM29YKR074W 468 nt-0.44□□□□□ -2.48
RFU1Q08003 YNL303WYNL303W 348 nt-0.44□□□□□ -2.48
RFU1Q08003 EAF6YJR082C 342 nt-0.45□□□□□ -2.48
RFU1Q08003 YLR282CYLR282C 342 nt-0.45□□□□□ -2.48
RFU1Q08003 YJL120WYJL120W 324 nt-0.46□□□□□ -2.48
RFU1Q08003 HTB2YBL002W 396 nt-0.46□□□□□ -2.48
RFU1Q08003 CBS1YDL069C 690 nt-0.47□□□□□ -2.48
RFU1Q08003 PCC1YKR095W-A 267 nt-0.47□□□□□ -2.48
RFU1Q08003 YLR101CYLR101C 396 nt-0.47□□□□□ -2.48
RFU1Q08003 YFL012WYFL012W 447 nt-0.48□□□□□ -2.49
RFU1Q08003 YLR456WYLR456W 615 nt-0.48□□□□□ -2.49
RFU1Q08003 YHR007C-AYHR007C-A 216 nt-0.49□□□□□ -2.49
RFU1Q08003 YJL007CYJL007C 315 nt-0.49□□□□□ -2.49
RFU1Q08003 YKL123WYKL123W 381 nt-0.5□□□□□ -2.49
RFU1Q08003 YHR138CYHR138C 345 nt-0.51□□□□□ -2.49
RFU1Q08003 YDR354C-AYDR354C-A 144 nt-0.53□□□□□ -2.49
RFU1Q08003 snR54snR54 86 nt-0.54□□□□□ -2.5
RFU1Q08003 RAD61YDR014W 1944 nt-0.55□□□□□ -2.5
RFU1Q08003 SNU13YEL026W 381 nt-0.55□□□□□ -2.5
RFU1Q08003 YHR130CYHR130C 336 nt-0.55□□□□□ -2.5
RFU1Q08003 YOR161W-AYOR161W-A 81 nt-0.55□□□□□ -2.5
RFU1Q08003 SEC10YLR166C 2616 nt-0.56□□□□□ -2.5
RFU1Q08003 YPL205CYPL205C 345 nt-0.56□□□□□ -2.5
RFU1Q08003 snR46snR46 197 nt-0.56□□□□□ -2.5
RFU1Q08003 BI2Q0110 1272 nt-0.57□□□□□ -2.5
RFU1Q08003 YBR072C-AYBR072C-A 162 nt-0.57□□□□□ -2.5
RFU1Q08003 YBR099CYBR099C 384 nt-0.57□□□□□ -2.5
RFU1Q08003 YJL026C-AYJL026C-A 222 nt-0.58□□□□□ -2.5
RFU1Q08003 BLI1YKL061W 342 nt-0.58□□□□□ -2.5
RFU1Q08003 YMR158W-BYMR158W-B 321 nt-0.6□□□□□ -2.51
RFU1Q08003 YDR366CYDR366C 399 nt-0.61□□□□□ -2.51
RFU1Q08003 STE18YJR086W 333 nt-0.61□□□□□ -2.51
RFU1Q08003 YLR041WYLR041W 321 nt-0.61□□□□□ -2.51
RFU1Q08003 URB1YKL014C 5295 nt-0.61□□□□□ -2.51
RFU1Q08003 EST1YLR233C 2100 nt-0.61□□□□□ -2.51
RFU1Q08003 YGL123C-AYGL123C-A 231 nt-0.62□□□□□ -2.51
RFU1Q08003 YAR029WYAR029W 225 nt-0.62□□□□□ -2.51
RFU1Q08003 YJL113WYJL113W 4647 nt-0.62□□□□□ -2.51
RFU1Q08003 YIR030W-AYIR030W-A 384 nt-0.63□□□□□ -2.51
RFU1Q08003 YER006C-AYER006C-A 318 nt-0.64□□□□□ -2.51
RFU1Q08003 YEL020C-BYEL020C-B 198 nt-0.66□□□□□ -2.52
RFU1Q08003 YKL100W-AYKL100W-A 90 nt-0.66□□□□□ -2.52
RFU1Q08003 VPS20YMR077C 666 nt-0.66□□□□□ -2.52
RFU1Q08003 PRM3YPL192C 402 nt-0.66□□□□□ -2.52
RFU1Q08003 YNL122CYNL122C 348 nt-0.68□□□□□ -2.52
RFU1Q08003 YPR170W-AYPR170W-A 186 nt-0.68□□□□□ -2.52
RFU1Q08003 CSN9YDR179C 489 nt-0.69□□□□□ -2.52
RFU1Q08003 snR41snR41 95 nt-0.69□□□□□ -2.52
RFU1Q08003 TOM22YNL131W 459 nt-0.71□□□□□ -2.52
RFU1Q08003 GLG1YKR058W 1851 nt-0.71□□□□□ -2.52
RFU1Q08003 YFL063WYFL063W 456 nt-0.73□□□□□ -2.53
RFU1Q08003 AGA2YGL032C 264 nt-0.74□□□□□ -2.53
RFU1Q08003 RPS27BYHR021C 249 nt-0.74□□□□□ -2.53
RFU1Q08003 tR(UCU)Q1tR(UCU)Q1 73 nt-0.75□□□□□ -2.53
RFU1Q08003 YIL071W-AYIL071W-A 477 nt-0.75□□□□□ -2.53
RFU1Q08003 SDH6YDR379C-A 240 nt-0.77□□□□□ -2.53
RFU1Q08003 CSE2YNR010W 450 nt-0.77□□□□□ -2.53
RFU1Q08003 YNL067W-BYNL067W-B 141 nt-0.78□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 73.8 ms