Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.6■□□□□ 0.41
LSM6P62312 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 KRT16P6-202ENST00000425692 1426 ntBASIC17.6■□□□□ 0.41
LSM6P62312 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LSM6P62312 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.6■□□□□ 0.41
LSM6P62312 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.6■□□□□ 0.41
LSM6P62312 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.6■□□□□ 0.41
LSM6P62312 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM6P62312 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LSM6P62312 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM6P62312 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LSM6P62312 AL691432.2-201ENST00000607222 2038 ntBASIC17.59■□□□□ 0.41
LSM6P62312 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 TMEM179-206ENST00000616017 1645 ntBASIC17.59■□□□□ 0.41
LSM6P62312 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LSM6P62312 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 CROCCP5-201ENST00000436658 830 ntBASIC17.59■□□□□ 0.41
LSM6P62312 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.59■□□□□ 0.41
LSM6P62312 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.59■□□□□ 0.41
LSM6P62312 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSM6P62312 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM6P62312 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSM6P62312 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.59■□□□□ 0.41
LSM6P62312 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM6P62312 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LSM6P62312 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM6P62312 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM6P62312 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM6P62312 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM6P62312 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM6P62312 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.58■□□□□ 0.4
LSM6P62312 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM6P62312 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.58■□□□□ 0.4
LSM6P62312 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.58■□□□□ 0.4
LSM6P62312 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM6P62312 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.58■□□□□ 0.4
LSM6P62312 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.58■□□□□ 0.4
LSM6P62312 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM6P62312 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSM6P62312 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSM6P62312 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LSM6P62312 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.58■□□□□ 0.4
LSM6P62312 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.58■□□□□ 0.4
LSM6P62312 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LSM6P62312 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LSM6P62312 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.57■□□□□ 0.4
LSM6P62312 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM6P62312 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.57■□□□□ 0.4
LSM6P62312 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM6P62312 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.57■□□□□ 0.4
LSM6P62312 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LSM6P62312 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSM6P62312 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LSM6P62312 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.56■□□□□ 0.4
LSM6P62312 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 PCDHAC2-203ENST00000615316 3011 ntBASIC17.56■□□□□ 0.4
LSM6P62312 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LSM6P62312 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LSM6P62312 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM6P62312 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LSM6P62312 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM6P62312 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LSM6P62312 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.56■□□□□ 0.4
LSM6P62312 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LSM6P62312 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.56■□□□□ 0.4
LSM6P62312 AL121832.2-201ENST00000610979 668 ntBASIC17.56■□□□□ 0.4
LSM6P62312 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms