Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLDN20P56880 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLDN20P56880 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLDN20P56880 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CLDN20P56880 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN20P56880 AP005212.1-201ENST00000581547 1997 ntBASIC18.33■□□□□ 0.53
CLDN20P56880 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN20P56880 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.33■□□□□ 0.53
CLDN20P56880 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CLDN20P56880 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLDN20P56880 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLDN20P56880 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN20P56880 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN20P56880 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN20P56880 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN20P56880 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN20P56880 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN20P56880 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN20P56880 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN20P56880 MIR2861-201ENST00000636310 90 ntBASIC18.33■□□□□ 0.52
CLDN20P56880 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN20P56880 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN20P56880 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLDN20P56880 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CLDN20P56880 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLDN20P56880 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.32■□□□□ 0.52
CLDN20P56880 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN20P56880 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CLDN20P56880 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN20P56880 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN20P56880 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLDN20P56880 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLDN20P56880 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.31■□□□□ 0.52
CLDN20P56880 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN20P56880 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN20P56880 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN20P56880 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CLDN20P56880 FP700111.2-201ENST00000619190 1892 ntBASIC18.31■□□□□ 0.52
CLDN20P56880 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN20P56880 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN20P56880 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN20P56880 CD99P1-205ENST00000527459 561 ntBASIC18.3■□□□□ 0.52
CLDN20P56880 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CLDN20P56880 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN20P56880 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN20P56880 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN20P56880 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN20P56880 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN20P56880 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms