Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDX1P52945 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDX1P52945 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.46■□□□□ 0.71
PDX1P52945 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.46■□□□□ 0.71
PDX1P52945 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.46■□□□□ 0.71
PDX1P52945 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.46■□□□□ 0.71
PDX1P52945 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.46■□□□□ 0.71
PDX1P52945 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDX1P52945 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDX1P52945 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
PDX1P52945 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PDX1P52945 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
PDX1P52945 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDX1P52945 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.45■□□□□ 0.7
PDX1P52945 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.45■□□□□ 0.7
PDX1P52945 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PDX1P52945 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDX1P52945 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDX1P52945 KRT17P2-201ENST00000300992 1314 ntBASIC19.45■□□□□ 0.7
PDX1P52945 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.45■□□□□ 0.7
PDX1P52945 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDX1P52945 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.44■□□□□ 0.7
PDX1P52945 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.44■□□□□ 0.7
PDX1P52945 AL135905.2-201ENST00000584934 1404 ntBASIC19.44■□□□□ 0.7
PDX1P52945 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDX1P52945 AL390719.1-204ENST00000412397 1219 ntBASIC19.44■□□□□ 0.7
PDX1P52945 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.44■□□□□ 0.7
PDX1P52945 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PDX1P52945 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.44■□□□□ 0.7
PDX1P52945 RARRES2P10-201ENST00000564312 460 ntBASIC19.44■□□□□ 0.7
PDX1P52945 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.44■□□□□ 0.7
PDX1P52945 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.44■□□□□ 0.7
PDX1P52945 MIR4785-201ENST00000585005 73 ntBASIC19.44■□□□□ 0.7
PDX1P52945 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.44■□□□□ 0.7
PDX1P52945 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.44■□□□□ 0.7
PDX1P52945 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PDX1P52945 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDX1P52945 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 MIR1224-201ENST00000408193 85 ntBASIC19.43■□□□□ 0.7
PDX1P52945 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.43■□□□□ 0.7
PDX1P52945 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.43■□□□□ 0.7
PDX1P52945 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.43■□□□□ 0.7
PDX1P52945 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 AP001412.1-201ENST00000608405 714 ntBASIC19.43■□□□□ 0.7
PDX1P52945 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.43■□□□□ 0.7
PDX1P52945 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.43■□□□□ 0.7
PDX1P52945 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PDX1P52945 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.43■□□□□ 0.7
PDX1P52945 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDX1P52945 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDX1P52945 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.42■□□□□ 0.7
PDX1P52945 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDX1P52945 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.42■□□□□ 0.7
PDX1P52945 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
PDX1P52945 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.42■□□□□ 0.7
PDX1P52945 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.42■□□□□ 0.7
PDX1P52945 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms