Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.79■□□□□ 0.6
EFNA3P52797 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNA3P52797 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EFNA3P52797 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 SMG8-203ENST00000578922 2178 ntBASIC18.78■□□□□ 0.6
EFNA3P52797 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EFNA3P52797 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 RPPH1-201ENST00000516869 333 ntBASIC18.78■□□□□ 0.6
EFNA3P52797 C1QBPP2-201ENST00000528754 825 ntBASIC18.78■□□□□ 0.6
EFNA3P52797 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.78■□□□□ 0.6
EFNA3P52797 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
EFNA3P52797 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 AC092720.2-201ENST00000602388 1665 ntBASIC18.78■□□□□ 0.6
EFNA3P52797 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EFNA3P52797 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.78■□□□□ 0.6
EFNA3P52797 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
EFNA3P52797 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
EFNA3P52797 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.77■□□□□ 0.6
EFNA3P52797 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.77■□□□□ 0.6
EFNA3P52797 AL390719.1-204ENST00000412397 1219 ntBASIC18.77■□□□□ 0.6
EFNA3P52797 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.77■□□□□ 0.6
EFNA3P52797 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.77■□□□□ 0.6
EFNA3P52797 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.77■□□□□ 0.6
EFNA3P52797 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EFNA3P52797 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EFNA3P52797 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.76■□□□□ 0.59
EFNA3P52797 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
EFNA3P52797 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.76■□□□□ 0.59
EFNA3P52797 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.76■□□□□ 0.59
EFNA3P52797 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.76■□□□□ 0.59
EFNA3P52797 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
EFNA3P52797 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EFNA3P52797 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
EFNA3P52797 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNA3P52797 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
EFNA3P52797 AC093827.2-201ENST00000512654 315 ntBASIC18.75■□□□□ 0.59
EFNA3P52797 AL031963.3-201ENST00000606441 850 ntBASIC18.75■□□□□ 0.59
EFNA3P52797 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNA3P52797 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNA3P52797 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.75■□□□□ 0.59
EFNA3P52797 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EFNA3P52797 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNA3P52797 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNA3P52797 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.74■□□□□ 0.59
EFNA3P52797 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNA3P52797 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.74■□□□□ 0.59
EFNA3P52797 AL023875.1-201ENST00000640777 796 ntBASIC18.74■□□□□ 0.59
EFNA3P52797 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EFNA3P52797 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.74■□□□□ 0.59
EFNA3P52797 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
EFNA3P52797 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EFNA3P52797 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms