Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 ECL1YGR146C 636 nt-0.51□□□□□ -2.49
VPS55P47111 YJL026C-AYJL026C-A 222 nt-0.51□□□□□ -2.49
VPS55P47111 YPT6YLR262C 648 nt-0.51□□□□□ -2.49
VPS55P47111 YPL225WYPL225W 441 nt-0.51□□□□□ -2.49
VPS55P47111 TAH1YCR060W 336 nt-0.52□□□□□ -2.49
VPS55P47111 YNL058CYNL058C 951 nt-0.52□□□□□ -2.49
VPS55P47111 YCR018C-AYCR018C-A 255 nt-0.53□□□□□ -2.49
VPS55P47111 YER175W-AYER175W-A 165 nt-0.53□□□□□ -2.49
VPS55P47111 BER1YLR412W 825 nt-0.53□□□□□ -2.49
VPS55P47111 GLG1YKR058W 1851 nt-0.53□□□□□ -2.49
VPS55P47111 YJL113WYJL113W 4647 nt-0.53□□□□□ -2.5
VPS55P47111 YIR021W-AYIR021W-A 213 nt-0.54□□□□□ -2.5
VPS55P47111 YNL067W-BYNL067W-B 141 nt-0.54□□□□□ -2.5
VPS55P47111 RPM2YML091C 3609 nt-0.54□□□□□ -2.5
VPS55P47111 YIL029CYIL029C 429 nt-0.55□□□□□ -2.5
VPS55P47111 YJL020W-AYJL020W-A 258 nt-0.55□□□□□ -2.5
VPS55P47111 YMR307C-AYMR307C-A 195 nt-0.55□□□□□ -2.5
VPS55P47111 YPL182CYPL182C 384 nt-0.55□□□□□ -2.5
VPS55P47111 YCR100CYCR100C 951 nt-0.57□□□□□ -2.5
VPS55P47111 YPR170W-AYPR170W-A 186 nt-0.57□□□□□ -2.5
VPS55P47111 RPF1YHR088W 888 nt-0.58□□□□□ -2.5
VPS55P47111 YLR334CYLR334C 381 nt-0.59□□□□□ -2.5
VPS55P47111 YPL205CYPL205C 345 nt-0.59□□□□□ -2.5
VPS55P47111 HMLALPHA2YCL067C 633 nt-0.6□□□□□ -2.51
VPS55P47111 MATALPHA2YCR039C 633 nt-0.6□□□□□ -2.51
VPS55P47111 YJL120WYJL120W 324 nt-0.6□□□□□ -2.51
VPS55P47111 YOR192C-CYOR192C-C 237 nt-0.6□□□□□ -2.51
VPS55P47111 TSC3YBR058C-A 243 nt-0.6□□□□□ -2.51
VPS55P47111 YDL011CYDL011C 324 nt-0.61□□□□□ -2.51
VPS55P47111 YDL016CYDL016C 303 nt-0.61□□□□□ -2.51
VPS55P47111 YIR030W-AYIR030W-A 384 nt-0.61□□□□□ -2.51
VPS55P47111 YLR282CYLR282C 342 nt-0.61□□□□□ -2.51
VPS55P47111 YLR287CYLR287C 1068 nt-0.61□□□□□ -2.51
VPS55P47111 YBR099CYBR099C 384 nt-0.61□□□□□ -2.51
VPS55P47111 EST1YLR233C 2100 nt-0.62□□□□□ -2.51
VPS55P47111 URB1YKL014C 5295 nt-0.62□□□□□ -2.51
VPS55P47111 YLR269CYLR269C 351 nt-0.62□□□□□ -2.51
VPS55P47111 YOR161W-AYOR161W-A 81 nt-0.62□□□□□ -2.51
VPS55P47111 YDL007C-AYDL007C-A 258 nt-0.63□□□□□ -2.51
VPS55P47111 YDR354C-AYDR354C-A 144 nt-0.63□□□□□ -2.51
VPS55P47111 FYV7YLR068W 456 nt-0.63□□□□□ -2.51
VPS55P47111 ZEO1YOL109W 342 nt-0.63□□□□□ -2.51
VPS55P47111 YPL060C-AYPL060C-A 3315 nt-0.64□□□□□ -2.51
VPS55P47111 YDR426CYDR426C 378 nt-0.64□□□□□ -2.51
VPS55P47111 YKL083WYKL083W 615 nt-0.64□□□□□ -2.51
VPS55P47111 YBL071CYBL071C 309 nt-0.64□□□□□ -2.51
VPS55P47111 YPR002C-AYPR002C-A 198 nt-0.64□□□□□ -2.51
VPS55P47111 YHR138CYHR138C 345 nt-0.65□□□□□ -2.51
VPS55P47111 RPS25BYLR333C 327 nt-0.65□□□□□ -2.51
VPS55P47111 YOL038C-AYOL038C-A 96 nt-0.65□□□□□ -2.51
VPS55P47111 SNU13YEL026W 381 nt-0.67□□□□□ -2.52
VPS55P47111 BLI1YKL061W 342 nt-0.67□□□□□ -2.52
VPS55P47111 YAL066WYAL066W 309 nt-0.68□□□□□ -2.52
VPS55P47111 YLR041WYLR041W 321 nt-0.68□□□□□ -2.52
VPS55P47111 YMR158W-BYMR158W-B 321 nt-0.68□□□□□ -2.52
VPS55P47111 YPL229WYPL229W 621 nt-0.68□□□□□ -2.52
VPS55P47111 YBR072C-AYBR072C-A 162 nt-0.69□□□□□ -2.52
VPS55P47111 HMRA2YCR096C 360 nt-0.7□□□□□ -2.52
VPS55P47111 YPL068CYPL068C 882 nt-0.7□□□□□ -2.52
VPS55P47111 YML007C-AYML007C-A 111 nt-0.71□□□□□ -2.52
VPS55P47111 YFR009W-AYFR009W-A 258 nt-0.72□□□□□ -2.52
VPS55P47111 YLR264C-AYLR264C-A 117 nt-0.72□□□□□ -2.52
VPS55P47111 GRX5YPL059W 453 nt-0.72□□□□□ -2.52
VPS55P47111 GPI15YNL038W 690 nt-0.73□□□□□ -2.53
VPS55P47111 MRPS8YMR158W 468 nt-0.74□□□□□ -2.53
VPS55P47111 snR33snR33 183 nt-0.74□□□□□ -2.53
VPS55P47111 tT(UGU)G1tT(UGU)G1 72 nt-0.75□□□□□ -2.53
VPS55P47111 tT(UGU)G2tT(UGU)G2 72 nt-0.75□□□□□ -2.53
VPS55P47111 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
VPS55P47111 tA(UGC)QtA(UGC)Q 76 nt-0.76□□□□□ -2.53
VPS55P47111 YER084W-AYER084W-A 513 nt-0.76□□□□□ -2.53
VPS55P47111 YIL071W-AYIL071W-A 477 nt-0.76□□□□□ -2.53
VPS55P47111 YDR366CYDR366C 399 nt-0.78□□□□□ -2.53
VPS55P47111 CBS1YDL069C 690 nt-0.79□□□□□ -2.54
VPS55P47111 YGL123C-AYGL123C-A 231 nt-0.79□□□□□ -2.54
VPS55P47111 YHR007C-AYHR007C-A 216 nt-0.79□□□□□ -2.54
VPS55P47111 YHR130CYHR130C 336 nt-0.79□□□□□ -2.54
VPS55P47111 YER079WYER079W 633 nt-0.8□□□□□ -2.54
VPS55P47111 YNL303WYNL303W 348 nt-0.8□□□□□ -2.54
VPS55P47111 SDH6YDR379C-A 240 nt-0.81□□□□□ -2.54
VPS55P47111 YLR456WYLR456W 615 nt-0.81□□□□□ -2.54
VPS55P47111 AIM29YKR074W 468 nt-0.82□□□□□ -2.54
VPS55P47111 YML100W-AYML100W-A 174 nt-0.82□□□□□ -2.54
VPS55P47111 YAR047CYAR047C 321 nt-0.83□□□□□ -2.54
VPS55P47111 YFL012WYFL012W 447 nt-0.84□□□□□ -2.54
VPS55P47111 AGA2YGL032C 264 nt-0.84□□□□□ -2.54
VPS55P47111 YLR154W-FYLR154W-F 141 nt-0.84□□□□□ -2.54
VPS55P47111 YOR170WYOR170W 306 nt-0.84□□□□□ -2.54
VPS55P47111 PRM3YPL192C 402 nt-0.84□□□□□ -2.54
VPS55P47111 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
VPS55P47111 PCC1YKR095W-A 267 nt-0.85□□□□□ -2.55
VPS55P47111 CSN9YDR179C 489 nt-0.86□□□□□ -2.55
VPS55P47111 YGR174W-AYGR174W-A 87 nt-0.86□□□□□ -2.55
VPS55P47111 YEL020C-BYEL020C-B 198 nt-0.87□□□□□ -2.55
VPS55P47111 YER053C-AYER053C-A 114 nt-0.87□□□□□ -2.55
VPS55P47111 YGR069WYGR069W 336 nt-0.87□□□□□ -2.55
VPS55P47111 VPS20YMR077C 666 nt-0.87□□□□□ -2.55
VPS55P47111 YFL063WYFL063W 456 nt-0.88□□□□□ -2.55
VPS55P47111 YAR029WYAR029W 225 nt-0.88□□□□□ -2.55
VPS55P47111 YHL009W-BYHL009W-B 5409 nt-0.89□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms