Protein–RNA interactions for Protein: P47001

CIS3, Cell wall mannoprotein CIS3, yeastyeast

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIS3P47001 YMR272W-AYMR272W-A 114 nt0.52□□□□□ -2.33
CIS3P47001 PTP2YOR208W 2253 nt0.52□□□□□ -2.33
CIS3P47001 YLR334CYLR334C 381 nt0.51□□□□□ -2.33
CIS3P47001 YOR282WYOR282W 321 nt0.51□□□□□ -2.33
CIS3P47001 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
CIS3P47001 ASE1YOR058C 2658 nt0.51□□□□□ -2.33
CIS3P47001 LTE1YAL024C 4308 nt0.5□□□□□ -2.33
CIS3P47001 YDR118W-AYDR118W-A 117 nt0.49□□□□□ -2.33
CIS3P47001 YFR012W-AYFR012W-A 87 nt0.49□□□□□ -2.33
CIS3P47001 YGR035CYGR035C 351 nt0.49□□□□□ -2.33
CIS3P47001 HTB2YBL002W 396 nt0.49□□□□□ -2.33
CIS3P47001 SSS1YDR086C 243 nt0.48□□□□□ -2.33
CIS3P47001 YOR011W-AYOR011W-A 207 nt0.48□□□□□ -2.33
CIS3P47001 YPR159C-AYPR159C-A 102 nt0.48□□□□□ -2.33
CIS3P47001 AI1Q0050 2505 nt0.48□□□□□ -2.33
CIS3P47001 CHS6YJL099W 2241 nt0.48□□□□□ -2.33
CIS3P47001 YDR048CYDR048C 315 nt0.47□□□□□ -2.33
CIS3P47001 RPS25BYLR333C 327 nt0.47□□□□□ -2.33
CIS3P47001 BIL1YOR304C-A 231 nt0.47□□□□□ -2.33
CIS3P47001 YPL044CYPL044C 549 nt0.47□□□□□ -2.33
CIS3P47001 SGF11YPL047W 300 nt0.47□□□□□ -2.33
CIS3P47001 YHR063W-AYHR063W-A 336 nt0.46□□□□□ -2.34
CIS3P47001 YJL120WYJL120W 324 nt0.46□□□□□ -2.34
CIS3P47001 YNL211CYNL211C 261 nt0.46□□□□□ -2.34
CIS3P47001 YPR016W-AYPR016W-A 261 nt0.46□□□□□ -2.34
CIS3P47001 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
CIS3P47001 SPO21YOL091W 1830 nt0.45□□□□□ -2.34
CIS3P47001 MYO1YHR023W 5787 nt0.45□□□□□ -2.34
CIS3P47001 HMRA2YCR096C 360 nt0.45□□□□□ -2.34
CIS3P47001 YFL019CYFL019C 354 nt0.45□□□□□ -2.34
CIS3P47001 YHR007C-AYHR007C-A 216 nt0.45□□□□□ -2.34
CIS3P47001 BIR1YJR089W 2865 nt0.45□□□□□ -2.34
CIS3P47001 NPR2YEL062W 1848 nt0.44□□□□□ -2.34
CIS3P47001 YIL115W-AYIL115W-A 372 nt0.44□□□□□ -2.34
CIS3P47001 TAR1YLR154W-C 375 nt0.44□□□□□ -2.34
CIS3P47001 YPL225WYPL225W 441 nt0.44□□□□□ -2.34
CIS3P47001 YML002WYML002W 2214 nt0.43□□□□□ -2.34
CIS3P47001 UTP8YGR128C 2142 nt0.42□□□□□ -2.34
CIS3P47001 YAF9YNL107W 681 nt0.42□□□□□ -2.34
CIS3P47001 YAL063C-AYAL063C-A 291 nt0.41□□□□□ -2.34
CIS3P47001 YPR170W-AYPR170W-A 186 nt0.41□□□□□ -2.34
CIS3P47001 FYV10YIL097W 1551 nt0.4□□□□□ -2.34
CIS3P47001 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
CIS3P47001 YDL185C-AYDL185C-A 228 nt0.4□□□□□ -2.35
CIS3P47001 PAA1YDR071C 576 nt0.4□□□□□ -2.35
CIS3P47001 COG8YML071C 1824 nt0.4□□□□□ -2.35
CIS3P47001 YDR354C-AYDR354C-A 144 nt0.38□□□□□ -2.35
CIS3P47001 RPL26BYGR034W 384 nt0.38□□□□□ -2.35
CIS3P47001 snR60snR60 104 nt0.37□□□□□ -2.35
CIS3P47001 YHL046W-AYHL046W-A 327 nt0.37□□□□□ -2.35
CIS3P47001 YPR012WYPR012W 255 nt0.37□□□□□ -2.35
CIS3P47001 YPR160W-AYPR160W-A 81 nt0.37□□□□□ -2.35
CIS3P47001 PRP5YBR237W 2550 nt0.37□□□□□ -2.35
CIS3P47001 YDR102CYDR102C 333 nt0.36□□□□□ -2.35
CIS3P47001 YER078W-AYER078W-A 165 nt0.36□□□□□ -2.35
CIS3P47001 YIL134C-AYIL134C-A 204 nt0.36□□□□□ -2.35
CIS3P47001 HAL9YOL089C 3093 nt0.36□□□□□ -2.35
CIS3P47001 YCR018C-AYCR018C-A 255 nt0.35□□□□□ -2.35
CIS3P47001 RPS27BYHR021C 249 nt0.35□□□□□ -2.35
CIS3P47001 YPR197CYPR197C 564 nt0.35□□□□□ -2.35
CIS3P47001 VIK1YPL253C 1944 nt0.34□□□□□ -2.35
CIS3P47001 YJL127W-AYJL127W-A 117 nt0.34□□□□□ -2.36
CIS3P47001 IQG1YPL242C 4488 nt0.34□□□□□ -2.36
CIS3P47001 YOR192C-BYOR192C-B 5313 nt0.34□□□□□ -2.36
CIS3P47001 SEC8YPR055W 3198 nt0.34□□□□□ -2.36
CIS3P47001 BUL2YML111W 2763 nt0.34□□□□□ -2.36
CIS3P47001 YIL032CYIL032C 357 nt0.33□□□□□ -2.36
CIS3P47001 COX5BYIL111W 456 nt0.33□□□□□ -2.36
CIS3P47001 YAL067W-AYAL067W-A 228 nt0.33□□□□□ -2.36
CIS3P47001 snR190snR190 190 nt0.33□□□□□ -2.36
CIS3P47001 OST4YDL232W 111 nt0.32□□□□□ -2.36
CIS3P47001 snR36snR36 182 nt0.32□□□□□ -2.36
CIS3P47001 BEM3YPL115C 3387 nt0.32□□□□□ -2.36
CIS3P47001 HTL1YCR020W-B 237 nt0.31□□□□□ -2.36
CIS3P47001 tN(GUU)QtN(GUU)Q 71 nt0.31□□□□□ -2.36
CIS3P47001 YJL026C-AYJL026C-A 222 nt0.31□□□□□ -2.36
CIS3P47001 YLR399W-AYLR399W-A 105 nt0.31□□□□□ -2.36
CIS3P47001 CSE2YNR010W 450 nt0.31□□□□□ -2.36
CIS3P47001 YOR345CYOR345C 351 nt0.31□□□□□ -2.36
CIS3P47001 YPL038W-AYPL038W-A 192 nt0.31□□□□□ -2.36
CIS3P47001 SBH1YER087C-B 249 nt0.3□□□□□ -2.36
CIS3P47001 ABF2YMR072W 552 nt0.3□□□□□ -2.36
CIS3P47001 YPR092WYPR092W 306 nt0.3□□□□□ -2.36
CIS3P47001 PET111YMR257C 2403 nt0.3□□□□□ -2.36
CIS3P47001 PRP42YDR235W 1635 nt0.3□□□□□ -2.36
CIS3P47001 COY1YKL179C 2040 nt0.3□□□□□ -2.36
CIS3P47001 YFL032WYFL032W 321 nt0.29□□□□□ -2.36
CIS3P47001 YMR193C-AYMR193C-A 387 nt0.29□□□□□ -2.36
CIS3P47001 YMR307C-AYMR307C-A 195 nt0.29□□□□□ -2.36
CIS3P47001 YOR161W-AYOR161W-A 81 nt0.29□□□□□ -2.36
CIS3P47001 GIM4YEL003W 336 nt0.28□□□□□ -2.36
CIS3P47001 ULI1YFR026C 510 nt0.28□□□□□ -2.36
CIS3P47001 YKL136WYKL136W 399 nt0.28□□□□□ -2.36
CIS3P47001 YLR282CYLR282C 342 nt0.28□□□□□ -2.36
CIS3P47001 YDL240C-AYDL240C-A 138 nt0.27□□□□□ -2.37
CIS3P47001 YDR183C-AYDR183C-A 258 nt0.27□□□□□ -2.37
CIS3P47001 YLL019W-AYLL019W-A 93 nt0.27□□□□□ -2.37
CIS3P47001 YOR015WYOR015W 360 nt0.27□□□□□ -2.37
CIS3P47001 YFL063WYFL063W 456 nt0.26□□□□□ -2.37
CIS3P47001 YGL149WYGL149W 306 nt0.26□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms