Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.31■□□□□ 0.84
GRIA1P42261 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
GRIA1P42261 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.31■□□□□ 0.84
GRIA1P42261 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.31■□□□□ 0.84
GRIA1P42261 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.31■□□□□ 0.84
GRIA1P42261 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GRIA1P42261 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIA1P42261 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIA1P42261 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GRIA1P42261 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIA1P42261 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 MIR935-201ENST00000401179 91 ntBASIC20.3■□□□□ 0.84
GRIA1P42261 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.3■□□□□ 0.84
GRIA1P42261 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIA1P42261 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 KRT17P1-201ENST00000399211 1546 ntBASIC20.3■□□□□ 0.84
GRIA1P42261 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIA1P42261 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIA1P42261 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GRIA1P42261 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
GRIA1P42261 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.29■□□□□ 0.84
GRIA1P42261 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.29■□□□□ 0.84
GRIA1P42261 AC005181.1-201ENST00000604782 1256 ntBASIC20.29■□□□□ 0.84
GRIA1P42261 AC080038.1-201ENST00000611274 1154 ntBASIC20.29■□□□□ 0.84
GRIA1P42261 AC008694.1-202ENST00000636953 945 ntBASIC20.29■□□□□ 0.84
GRIA1P42261 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.29■□□□□ 0.84
GRIA1P42261 AC073111.5-205ENST00000641717 521 ntBASIC20.29■□□□□ 0.84
GRIA1P42261 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GRIA1P42261 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIA1P42261 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIA1P42261 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIA1P42261 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.28■□□□□ 0.84
GRIA1P42261 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIA1P42261 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIA1P42261 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIA1P42261 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
GRIA1P42261 CDCA4P2-201ENST00000441182 718 ntBASIC20.28■□□□□ 0.84
GRIA1P42261 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIA1P42261 OR10C1-204ENST00000622521 1039 ntBASIC20.28■□□□□ 0.84
GRIA1P42261 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIA1P42261 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
GRIA1P42261 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIA1P42261 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
GRIA1P42261 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GRIA1P42261 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
GRIA1P42261 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIA1P42261 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.27■□□□□ 0.84
GRIA1P42261 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.27■□□□□ 0.84
GRIA1P42261 AL050303.2-201ENST00000619798 666 ntBASIC20.27■□□□□ 0.84
GRIA1P42261 TMEM179-206ENST00000616017 1645 ntBASIC20.27■□□□□ 0.83
GRIA1P42261 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRIA1P42261 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.27■□□□□ 0.83
GRIA1P42261 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRIA1P42261 KRT8P17-201ENST00000453110 1448 ntBASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms