Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 YNL211CYNL211C 261 nt0.73□□□□□ -2.29
LCP5P40079 YPL038W-AYPL038W-A 192 nt0.72□□□□□ -2.29
LCP5P40079 YPL225WYPL225W 441 nt0.72□□□□□ -2.29
LCP5P40079 PMP1YCR024C-A 123 nt0.71□□□□□ -2.3
LCP5P40079 PAM16YJL104W 450 nt0.71□□□□□ -2.3
LCP5P40079 YDL073WYDL073W 2955 nt0.71□□□□□ -2.3
LCP5P40079 NPR2YEL062W 1848 nt0.71□□□□□ -2.3
LCP5P40079 YIL115W-AYIL115W-A 372 nt0.7□□□□□ -2.3
LCP5P40079 YMR321CYMR321C 318 nt0.69□□□□□ -2.3
LCP5P40079 YDR102CYDR102C 333 nt0.68□□□□□ -2.3
LCP5P40079 YFR012W-AYFR012W-A 87 nt0.68□□□□□ -2.3
LCP5P40079 RPL26BYGR034W 384 nt0.68□□□□□ -2.3
LCP5P40079 YHL046W-AYHL046W-A 327 nt0.68□□□□□ -2.3
LCP5P40079 snR60snR60 104 nt0.67□□□□□ -2.3
LCP5P40079 INA22YIR024C 651 nt0.67□□□□□ -2.3
LCP5P40079 COG8YML071C 1824 nt0.66□□□□□ -2.3
LCP5P40079 CHS6YJL099W 2241 nt0.65□□□□□ -2.3
LCP5P40079 RPS27BYHR021C 249 nt0.65□□□□□ -2.31
LCP5P40079 CSE2YNR010W 450 nt0.65□□□□□ -2.31
LCP5P40079 YOR218CYOR218C 420 nt0.65□□□□□ -2.31
LCP5P40079 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
LCP5P40079 snR36snR36 182 nt0.65□□□□□ -2.31
LCP5P40079 YML002WYML002W 2214 nt0.64□□□□□ -2.31
LCP5P40079 GIM4YEL003W 336 nt0.64□□□□□ -2.31
LCP5P40079 YIL032CYIL032C 357 nt0.63□□□□□ -2.31
LCP5P40079 VIK1YPL253C 1944 nt0.63□□□□□ -2.31
LCP5P40079 YDL240C-AYDL240C-A 138 nt0.62□□□□□ -2.31
LCP5P40079 YHR175W-AYHR175W-A 150 nt0.62□□□□□ -2.31
LCP5P40079 YMR031W-AYMR031W-A 327 nt0.62□□□□□ -2.31
LCP5P40079 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
LCP5P40079 YCR018C-AYCR018C-A 255 nt0.61□□□□□ -2.31
LCP5P40079 HTL1YCR020W-B 237 nt0.61□□□□□ -2.31
LCP5P40079 YGL149WYGL149W 306 nt0.61□□□□□ -2.31
LCP5P40079 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
LCP5P40079 ASE1YOR058C 2658 nt0.61□□□□□ -2.31
LCP5P40079 PRP16YKR086W 3216 nt0.6□□□□□ -2.31
LCP5P40079 snR56snR56 88 nt0.6□□□□□ -2.31
LCP5P40079 YDR354C-AYDR354C-A 144 nt0.6□□□□□ -2.31
LCP5P40079 HMRA1YCR097W 381 nt0.59□□□□□ -2.31
LCP5P40079 COX5BYIL111W 456 nt0.59□□□□□ -2.31
LCP5P40079 SEC8YPR055W 3198 nt0.59□□□□□ -2.32
LCP5P40079 YDL185C-AYDL185C-A 228 nt0.58□□□□□ -2.32
LCP5P40079 YMR193C-AYMR193C-A 387 nt0.58□□□□□ -2.32
LCP5P40079 YDR183C-AYDR183C-A 258 nt0.57□□□□□ -2.32
LCP5P40079 YFL032WYFL032W 321 nt0.57□□□□□ -2.32
LCP5P40079 YAL067W-AYAL067W-A 228 nt0.57□□□□□ -2.32
LCP5P40079 snR190snR190 190 nt0.57□□□□□ -2.32
LCP5P40079 FYV10YIL097W 1551 nt0.57□□□□□ -2.32
LCP5P40079 YPR160W-AYPR160W-A 81 nt0.56□□□□□ -2.32
LCP5P40079 YIL134C-AYIL134C-A 204 nt0.55□□□□□ -2.32
LCP5P40079 YJL127W-AYJL127W-A 117 nt0.55□□□□□ -2.32
LCP5P40079 YMR307C-AYMR307C-A 195 nt0.55□□□□□ -2.32
LCP5P40079 LTE1YAL024C 4308 nt0.55□□□□□ -2.32
LCP5P40079 ATP6Q0085 780 nt0.54□□□□□ -2.32
LCP5P40079 YFL063WYFL063W 456 nt0.54□□□□□ -2.32
LCP5P40079 YKL136WYKL136W 399 nt0.54□□□□□ -2.32
LCP5P40079 RPS30BYOR182C 192 nt0.54□□□□□ -2.32
LCP5P40079 YDR413CYDR413C 576 nt0.53□□□□□ -2.32
LCP5P40079 STF2YGR008C 255 nt0.53□□□□□ -2.32
LCP5P40079 tR(ACG)Q2tR(ACG)Q2 74 nt0.53□□□□□ -2.32
LCP5P40079 YKL118WYKL118W 312 nt0.53□□□□□ -2.32
LCP5P40079 YLR399W-AYLR399W-A 105 nt0.53□□□□□ -2.32
LCP5P40079 YMR160WYMR160W 2451 nt0.53□□□□□ -2.33
LCP5P40079 YNL028WYNL028W 318 nt0.52□□□□□ -2.33
LCP5P40079 COY1YKL179C 2040 nt0.5□□□□□ -2.33
LCP5P40079 PRP5YBR237W 2550 nt0.5□□□□□ -2.33
LCP5P40079 YJL026C-AYJL026C-A 222 nt0.5□□□□□ -2.33
LCP5P40079 PET111YMR257C 2403 nt0.5□□□□□ -2.33
LCP5P40079 YJL197C-AYJL197C-A 282 nt0.49□□□□□ -2.33
LCP5P40079 YLL019W-AYLL019W-A 93 nt0.49□□□□□ -2.33
LCP5P40079 YLR282CYLR282C 342 nt0.49□□□□□ -2.33
LCP5P40079 PRP42YDR235W 1635 nt0.49□□□□□ -2.33
LCP5P40079 OST4YDL232W 111 nt0.48□□□□□ -2.33
LCP5P40079 YER097WYER097W 330 nt0.48□□□□□ -2.33
LCP5P40079 YOR192C-BYOR192C-B 5313 nt0.48□□□□□ -2.33
LCP5P40079 RPL39YJL189W 156 nt0.47□□□□□ -2.33
LCP5P40079 HUG1YML058W-A 207 nt0.47□□□□□ -2.33
LCP5P40079 FMP27YLR454W 7887 nt0.47□□□□□ -2.33
LCP5P40079 YEL020C-BYEL020C-B 198 nt0.46□□□□□ -2.34
LCP5P40079 tN(GUU)QtN(GUU)Q 71 nt0.46□□□□□ -2.34
LCP5P40079 YPR092WYPR092W 306 nt0.46□□□□□ -2.34
LCP5P40079 STE5YDR103W 2754 nt0.46□□□□□ -2.34
LCP5P40079 PAU12YGR294W 363 nt0.45□□□□□ -2.34
LCP5P40079 YOR072W-BYOR072W-B 162 nt0.45□□□□□ -2.34
LCP5P40079 YOR161W-AYOR161W-A 81 nt0.45□□□□□ -2.34
LCP5P40079 UTP20YBL004W 7482 nt0.44□□□□□ -2.34
LCP5P40079 SBH1YER087C-B 249 nt0.44□□□□□ -2.34
LCP5P40079 YGL123C-AYGL123C-A 231 nt0.44□□□□□ -2.34
LCP5P40079 HAL9YOL089C 3093 nt0.44□□□□□ -2.34
LCP5P40079 ULI1YFR026C 510 nt0.43□□□□□ -2.34
LCP5P40079 YOR015WYOR015W 360 nt0.43□□□□□ -2.34
LCP5P40079 YOR345CYOR345C 351 nt0.43□□□□□ -2.34
LCP5P40079 RAD61YDR014W 1944 nt0.42□□□□□ -2.34
LCP5P40079 BLI1YKL061W 342 nt0.42□□□□□ -2.34
LCP5P40079 MYO1YHR023W 5787 nt0.42□□□□□ -2.34
LCP5P40079 YLR120W-AYLR120W-A 102 nt0.41□□□□□ -2.34
LCP5P40079 YKL100W-AYKL100W-A 90 nt0.39□□□□□ -2.35
LCP5P40079 ULP2YIL031W 3105 nt0.39□□□□□ -2.35
LCP5P40079 YCR022CYCR022C 345 nt0.38□□□□□ -2.35
LCP5P40079 NNF2YGR089W 2811 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 130.6 ms