Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 YGL230CYGL230C 444 nt-0.79□□□□□ -2.54
TDA2P40045 RPF1YHR088W 888 nt-0.79□□□□□ -2.54
TDA2P40045 YER175W-AYER175W-A 165 nt-0.81□□□□□ -2.54
TDA2P40045 SVS1YPL163C 783 nt-0.81□□□□□ -2.54
TDA2P40045 YPR092WYPR092W 306 nt-0.82□□□□□ -2.54
TDA2P40045 TAR1YLR154W-C 375 nt-0.83□□□□□ -2.54
TDA2P40045 TSC3YBR058C-A 243 nt-0.83□□□□□ -2.54
TDA2P40045 YHL041WYHL041W 450 nt-0.84□□□□□ -2.54
TDA2P40045 YNL058CYNL058C 951 nt-0.84□□□□□ -2.54
TDA2P40045 URB1YKL014C 5295 nt-0.85□□□□□ -2.54
TDA2P40045 YJR087WYJR087W 351 nt-0.85□□□□□ -2.55
TDA2P40045 YCR022CYCR022C 345 nt-0.86□□□□□ -2.55
TDA2P40045 YIL029CYIL029C 429 nt-0.86□□□□□ -2.55
TDA2P40045 PCF11YDR228C 1881 nt-0.86□□□□□ -2.55
TDA2P40045 YKL044WYKL044W 321 nt-0.88□□□□□ -2.55
TDA2P40045 UTP8YGR128C 2142 nt-0.89□□□□□ -2.55
TDA2P40045 YJL020W-AYJL020W-A 258 nt-0.89□□□□□ -2.55
TDA2P40045 HMLALPHA2YCL067C 633 nt-0.91□□□□□ -2.56
TDA2P40045 MATALPHA2YCR039C 633 nt-0.91□□□□□ -2.56
TDA2P40045 HMRA2YCR096C 360 nt-0.91□□□□□ -2.56
TDA2P40045 RPM2YML091C 3609 nt-0.91□□□□□ -2.56
TDA2P40045 ZEO1YOL109W 342 nt-0.92□□□□□ -2.56
TDA2P40045 YBR099CYBR099C 384 nt-0.92□□□□□ -2.56
TDA2P40045 YLR282CYLR282C 342 nt-0.93□□□□□ -2.56
TDA2P40045 YDL011CYDL011C 324 nt-0.94□□□□□ -2.56
TDA2P40045 YLR287CYLR287C 1068 nt-0.94□□□□□ -2.56
TDA2P40045 EST1YLR233C 2100 nt-0.95□□□□□ -2.56
TDA2P40045 ISF1YMR081C 1017 nt-0.95□□□□□ -2.56
TDA2P40045 YNL067W-BYNL067W-B 141 nt-0.95□□□□□ -2.56
TDA2P40045 YDL016CYDL016C 303 nt-0.96□□□□□ -2.56
TDA2P40045 YHR138CYHR138C 345 nt-0.96□□□□□ -2.56
TDA2P40045 YPL229WYPL229W 621 nt-0.96□□□□□ -2.56
TDA2P40045 YPR002C-AYPR002C-A 198 nt-0.96□□□□□ -2.56
TDA2P40045 tT(UGU)G1tT(UGU)G1 72 nt-0.98□□□□□ -2.57
TDA2P40045 tT(UGU)G2tT(UGU)G2 72 nt-0.98□□□□□ -2.57
TDA2P40045 tT(UGU)PtT(UGU)P 72 nt-0.98□□□□□ -2.57
TDA2P40045 FYV7YLR068W 456 nt-0.98□□□□□ -2.57
TDA2P40045 YIL071W-AYIL071W-A 477 nt-0.99□□□□□ -2.57
TDA2P40045 snR33snR33 183 nt-0.99□□□□□ -2.57
TDA2P40045 BLI1YKL061W 342 nt-1□□□□□ -2.57
TDA2P40045 YMR158W-BYMR158W-B 321 nt-1□□□□□ -2.57
TDA2P40045 YBL071CYBL071C 309 nt-1□□□□□ -2.57
TDA2P40045 YBR072C-AYBR072C-A 162 nt-1□□□□□ -2.57
TDA2P40045 YCR100CYCR100C 951 nt-1.01□□□□□ -2.57
TDA2P40045 SNU13YEL026W 381 nt-1.01□□□□□ -2.57
TDA2P40045 YLR334CYLR334C 381 nt-1.01□□□□□ -2.57
TDA2P40045 RPS25BYLR333C 327 nt-1.02□□□□□ -2.57
TDA2P40045 YML007C-AYML007C-A 111 nt-1.03□□□□□ -2.57
TDA2P40045 YKL083WYKL083W 615 nt-1.04□□□□□ -2.58
TDA2P40045 YNL303WYNL303W 348 nt-1.04□□□□□ -2.58
TDA2P40045 YDL007C-AYDL007C-A 258 nt-1.05□□□□□ -2.58
TDA2P40045 YDR426CYDR426C 378 nt-1.05□□□□□ -2.58
TDA2P40045 YLR041WYLR041W 321 nt-1.05□□□□□ -2.58
TDA2P40045 MRPS8YMR158W 468 nt-1.05□□□□□ -2.58
TDA2P40045 YJL120WYJL120W 324 nt-1.06□□□□□ -2.58
TDA2P40045 YPL068CYPL068C 882 nt-1.06□□□□□ -2.58
TDA2P40045 YHR007C-AYHR007C-A 216 nt-1.07□□□□□ -2.58
TDA2P40045 YOR161W-AYOR161W-A 81 nt-1.07□□□□□ -2.58
TDA2P40045 YLR269CYLR269C 351 nt-1.08□□□□□ -2.58
TDA2P40045 YDR354C-AYDR354C-A 144 nt-1.09□□□□□ -2.58
TDA2P40045 YDR366CYDR366C 399 nt-1.1□□□□□ -2.59
TDA2P40045 GLG1YKR058W 1851 nt-1.1□□□□□ -2.59
TDA2P40045 tA(UGC)QtA(UGC)Q 76 nt-1.14□□□□□ -2.59
TDA2P40045 YGR174W-AYGR174W-A 87 nt-1.15□□□□□ -2.59
TDA2P40045 YAL066WYAL066W 309 nt-1.15□□□□□ -2.59
TDA2P40045 YGL123C-AYGL123C-A 231 nt-1.16□□□□□ -2.6
TDA2P40045 GRX5YPL059W 453 nt-1.16□□□□□ -2.6
TDA2P40045 AGA2YGL032C 264 nt-1.17□□□□□ -2.6
TDA2P40045 YJL026C-AYJL026C-A 222 nt-1.18□□□□□ -2.6
TDA2P40045 PCC1YKR095W-A 267 nt-1.18□□□□□ -2.6
TDA2P40045 YFR009W-AYFR009W-A 258 nt-1.19□□□□□ -2.6
TDA2P40045 YOL038C-AYOL038C-A 96 nt-1.19□□□□□ -2.6
TDA2P40045 YJL113WYJL113W 4647 nt-1.2□□□□□ -2.6
TDA2P40045 YLR264C-AYLR264C-A 117 nt-1.2□□□□□ -2.6
TDA2P40045 YOR192C-CYOR192C-C 237 nt-1.2□□□□□ -2.6
TDA2P40045 snR161snR161 161 nt-1.2□□□□□ -2.6
TDA2P40045 snR36snR36 182 nt-1.2□□□□□ -2.6
TDA2P40045 YAR047CYAR047C 321 nt-1.21□□□□□ -2.6
TDA2P40045 GPI15YNL038W 690 nt-1.21□□□□□ -2.6
TDA2P40045 PAU9YBL108C-A 129 nt-1.21□□□□□ -2.6
TDA2P40045 YER079WYER079W 633 nt-1.22□□□□□ -2.6
TDA2P40045 YKL100W-AYKL100W-A 90 nt-1.23□□□□□ -2.61
TDA2P40045 YFL012WYFL012W 447 nt-1.25□□□□□ -2.61
TDA2P40045 YLR456WYLR456W 615 nt-1.25□□□□□ -2.61
TDA2P40045 SDH6YDR379C-A 240 nt-1.26□□□□□ -2.61
TDA2P40045 COG6YNL041C 2520 nt-1.26□□□□□ -2.61
TDA2P40045 YEL020C-BYEL020C-B 198 nt-1.27□□□□□ -2.61
TDA2P40045 YHR130CYHR130C 336 nt-1.27□□□□□ -2.61
TDA2P40045 AIM29YKR074W 468 nt-1.28□□□□□ -2.61
TDA2P40045 YML100W-AYML100W-A 174 nt-1.29□□□□□ -2.62
TDA2P40045 YAR029WYAR029W 225 nt-1.3□□□□□ -2.62
TDA2P40045 YHL009W-BYHL009W-B 5409 nt-1.3□□□□□ -2.62
TDA2P40045 CBS1YDL069C 690 nt-1.33□□□□□ -2.62
TDA2P40045 YIL002W-AYIL002W-A 210 nt-1.33□□□□□ -2.62
TDA2P40045 YHR125WYHR125W 306 nt-1.35□□□□□ -2.63
TDA2P40045 PRM3YPL192C 402 nt-1.35□□□□□ -2.63
TDA2P40045 YPL060C-AYPL060C-A 3315 nt-1.37□□□□□ -2.63
TDA2P40045 YFL063WYFL063W 456 nt-1.37□□□□□ -2.63
TDA2P40045 YBR223W-AYBR223W-A 120 nt-1.37□□□□□ -2.63
TDA2P40045 YER084W-AYER084W-A 513 nt-1.38□□□□□ -2.63
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms