Protein–RNA interactions for Protein: P38337

SHG1, COMPASS component SHG1, yeastyeast

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHG1P38337 snR45snR45 172 nt-0.26□□□□□ -2.45
SHG1P38337 HMRA2YCR096C 360 nt-0.27□□□□□ -2.45
SHG1P38337 YCR018C-AYCR018C-A 255 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)BtF(GAA)B 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)FtF(GAA)F 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)GtF(GAA)G 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)H1tF(GAA)H1 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)H2tF(GAA)H2 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)MtF(GAA)M 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)P1tF(GAA)P1 73 nt-0.28□□□□□ -2.45
SHG1P38337 tF(GAA)P2tF(GAA)P2 73 nt-0.28□□□□□ -2.45
SHG1P38337 YMR307C-AYMR307C-A 195 nt-0.28□□□□□ -2.45
SHG1P38337 BUL2YML111W 2763 nt-0.28□□□□□ -2.45
SHG1P38337 YDR426CYDR426C 378 nt-0.29□□□□□ -2.46
SHG1P38337 YER078W-AYER078W-A 165 nt-0.29□□□□□ -2.46
SHG1P38337 FYV7YLR068W 456 nt-0.29□□□□□ -2.46
SHG1P38337 YGR174W-AYGR174W-A 87 nt-0.3□□□□□ -2.46
SHG1P38337 ISF1YMR081C 1017 nt-0.3□□□□□ -2.46
SHG1P38337 PCF11YDR228C 1881 nt-0.31□□□□□ -2.46
SHG1P38337 YAR047CYAR047C 321 nt-0.31□□□□□ -2.46
SHG1P38337 CBS1YDL069C 690 nt-0.32□□□□□ -2.46
SHG1P38337 YLR334CYLR334C 381 nt-0.32□□□□□ -2.46
SHG1P38337 THO2YNL139C 4794 nt-0.33□□□□□ -2.46
SHG1P38337 STF2YGR008C 255 nt-0.33□□□□□ -2.46
SHG1P38337 YHR131W-AYHR131W-A 246 nt-0.33□□□□□ -2.46
SHG1P38337 YJL120WYJL120W 324 nt-0.35□□□□□ -2.47
SHG1P38337 RPS25BYLR333C 327 nt-0.35□□□□□ -2.47
SHG1P38337 YCR022CYCR022C 345 nt-0.36□□□□□ -2.47
SHG1P38337 YLR456WYLR456W 615 nt-0.36□□□□□ -2.47
SHG1P38337 YPL068CYPL068C 882 nt-0.36□□□□□ -2.47
SHG1P38337 snR8snR8 190 nt-0.37□□□□□ -2.47
SHG1P38337 YHR130CYHR130C 336 nt-0.37□□□□□ -2.47
SHG1P38337 STE18YJR086W 333 nt-0.37□□□□□ -2.47
SHG1P38337 YLL006W-AYLL006W-A 177 nt-0.37□□□□□ -2.47
SHG1P38337 YEL073CYEL073C 324 nt-0.38□□□□□ -2.47
SHG1P38337 YNL303WYNL303W 348 nt-0.38□□□□□ -2.47
SHG1P38337 YOL014WYOL014W 375 nt-0.38□□□□□ -2.47
SHG1P38337 YPR092WYPR092W 306 nt-0.38□□□□□ -2.47
SHG1P38337 snR54snR54 86 nt-0.38□□□□□ -2.47
SHG1P38337 PCC1YKR095W-A 267 nt-0.39□□□□□ -2.47
SHG1P38337 BI2Q0110 1272 nt-0.4□□□□□ -2.47
SHG1P38337 YKL136WYKL136W 399 nt-0.41□□□□□ -2.48
SHG1P38337 YAR053WYAR053W 297 nt-0.41□□□□□ -2.48
SHG1P38337 snR128snR128 126 nt-0.41□□□□□ -2.48
SHG1P38337 YLR282CYLR282C 342 nt-0.43□□□□□ -2.48
SHG1P38337 HUG1YML058W-A 207 nt-0.44□□□□□ -2.48
SHG1P38337 YDR210WYDR210W 228 nt-0.45□□□□□ -2.48
SHG1P38337 ECL1YGR146C 636 nt-0.46□□□□□ -2.48
SHG1P38337 YHR007C-AYHR007C-A 216 nt-0.46□□□□□ -2.48
SHG1P38337 YHR138CYHR138C 345 nt-0.48□□□□□ -2.49
SHG1P38337 YLR101CYLR101C 396 nt-0.48□□□□□ -2.49
SHG1P38337 snR78snR78 87 nt-0.49□□□□□ -2.49
SHG1P38337 YER006C-AYER006C-A 318 nt-0.49□□□□□ -2.49
SHG1P38337 tR(UCU)Q1tR(UCU)Q1 73 nt-0.49□□□□□ -2.49
SHG1P38337 TFB5YDR079C-A 219 nt-0.5□□□□□ -2.49
SHG1P38337 YDR354C-AYDR354C-A 144 nt-0.5□□□□□ -2.49
SHG1P38337 YNL122CYNL122C 348 nt-0.51□□□□□ -2.49
SHG1P38337 SBH2YER019C-A 267 nt-0.52□□□□□ -2.49
SHG1P38337 YJL026C-AYJL026C-A 222 nt-0.53□□□□□ -2.49
SHG1P38337 HTB2YBL002W 396 nt-0.54□□□□□ -2.5
SHG1P38337 SNU13YEL026W 381 nt-0.56□□□□□ -2.5
SHG1P38337 YOR161W-AYOR161W-A 81 nt-0.56□□□□□ -2.5
SHG1P38337 YGR164WYGR164W 336 nt-0.57□□□□□ -2.5
SHG1P38337 YAR029WYAR029W 225 nt-0.57□□□□□ -2.5
SHG1P38337 snR41snR41 95 nt-0.57□□□□□ -2.5
SHG1P38337 YLR041WYLR041W 321 nt-0.58□□□□□ -2.5
SHG1P38337 VPS20YMR077C 666 nt-0.58□□□□□ -2.5
SHG1P38337 YNR025CYNR025C 360 nt-0.58□□□□□ -2.5
SHG1P38337 TOM22YNL131W 459 nt-0.59□□□□□ -2.5
SHG1P38337 PRP39YML046W 1890 nt-0.59□□□□□ -2.5
SHG1P38337 CSN9YDR179C 489 nt-0.62□□□□□ -2.51
SHG1P38337 QCR9YGR183C 201 nt-0.62□□□□□ -2.51
SHG1P38337 YJL007CYJL007C 315 nt-0.62□□□□□ -2.51
SHG1P38337 YBR072C-AYBR072C-A 162 nt-0.62□□□□□ -2.51
SHG1P38337 YBR099CYBR099C 384 nt-0.62□□□□□ -2.51
SHG1P38337 RAD61YDR014W 1944 nt-0.63□□□□□ -2.51
SHG1P38337 YGL123C-AYGL123C-A 231 nt-0.63□□□□□ -2.51
SHG1P38337 SEC10YLR166C 2616 nt-0.64□□□□□ -2.51
SHG1P38337 BLI1YKL061W 342 nt-0.64□□□□□ -2.51
SHG1P38337 PRM3YPL192C 402 nt-0.64□□□□□ -2.51
SHG1P38337 YDR366CYDR366C 399 nt-0.65□□□□□ -2.51
SHG1P38337 YEL020C-BYEL020C-B 198 nt-0.65□□□□□ -2.51
SHG1P38337 YMR158W-BYMR158W-B 321 nt-0.65□□□□□ -2.51
SHG1P38337 snR46snR46 197 nt-0.66□□□□□ -2.52
SHG1P38337 YOR032W-AYOR032W-A 201 nt-0.67□□□□□ -2.52
SHG1P38337 YKL100W-AYKL100W-A 90 nt-0.69□□□□□ -2.52
SHG1P38337 YLR434CYLR434C 384 nt-0.7□□□□□ -2.52
SHG1P38337 YPL205CYPL205C 345 nt-0.7□□□□□ -2.52
SHG1P38337 EST1YLR233C 2100 nt-0.71□□□□□ -2.52
SHG1P38337 YIR030W-AYIR030W-A 384 nt-0.71□□□□□ -2.52
SHG1P38337 YOL013W-BYOL013W-B 291 nt-0.72□□□□□ -2.52
SHG1P38337 YFL063WYFL063W 456 nt-0.73□□□□□ -2.53
SHG1P38337 RPS27BYHR021C 249 nt-0.73□□□□□ -2.53
SHG1P38337 CSE1YGL238W 2883 nt-0.74□□□□□ -2.53
SHG1P38337 URB1YKL014C 5295 nt-0.75□□□□□ -2.53
SHG1P38337 YIL115W-AYIL115W-A 372 nt-0.77□□□□□ -2.53
SHG1P38337 GLG1YKR058W 1851 nt-0.78□□□□□ -2.53
SHG1P38337 CSE2YNR010W 450 nt-0.78□□□□□ -2.53
SHG1P38337 YPR170W-AYPR170W-A 186 nt-0.79□□□□□ -2.54
SHG1P38337 AGA2YGL032C 264 nt-0.81□□□□□ -2.54
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms