Protein–RNA interactions for Protein: P38244

PFF1, Vacuolar membrane protease, yeastyeast

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFF1P38244 STO1YMR125W 2586 nt1.09□□□□□ -2.23
PFF1P38244 CUL3YGR003W 2235 nt1.09□□□□□ -2.24
PFF1P38244 RAD61YDR014W 1944 nt1.09□□□□□ -2.24
PFF1P38244 CDC39YCR093W 6327 nt1.08□□□□□ -2.24
PFF1P38244 YHL042WYHL042W 453 nt1.08□□□□□ -2.24
PFF1P38244 PKH2YOL100W 3246 nt1.08□□□□□ -2.24
PFF1P38244 VIK1YPL253C 1944 nt1.07□□□□□ -2.24
PFF1P38244 YDL206WYDL206W 2289 nt1.07□□□□□ -2.24
PFF1P38244 SLD3YGL113W 2007 nt1.06□□□□□ -2.24
PFF1P38244 COG8YML071C 1824 nt1.06□□□□□ -2.24
PFF1P38244 SPO21YOL091W 1830 nt1.05□□□□□ -2.24
PFF1P38244 YCR022CYCR022C 345 nt1.05□□□□□ -2.24
PFF1P38244 APL1YJR005W 2103 nt1.05□□□□□ -2.24
PFF1P38244 CSE2YNR010W 450 nt1.05□□□□□ -2.24
PFF1P38244 YOR015WYOR015W 360 nt1.05□□□□□ -2.24
PFF1P38244 YLL007CYLL007C 1998 nt1.05□□□□□ -2.24
PFF1P38244 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
PFF1P38244 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
PFF1P38244 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
PFF1P38244 YJL120WYJL120W 324 nt1.04□□□□□ -2.24
PFF1P38244 RPS25BYLR333C 327 nt1.04□□□□□ -2.24
PFF1P38244 YMR321CYMR321C 318 nt1.04□□□□□ -2.24
PFF1P38244 YOR282WYOR282W 321 nt1.04□□□□□ -2.24
PFF1P38244 YBR206WYBR206W 324 nt1.04□□□□□ -2.24
PFF1P38244 PTP2YOR208W 2253 nt1.04□□□□□ -2.24
PFF1P38244 YDR521WYDR521W 336 nt1.03□□□□□ -2.24
PFF1P38244 YEL020C-BYEL020C-B 198 nt1.03□□□□□ -2.24
PFF1P38244 YPL152W-AYPL152W-A 99 nt1.03□□□□□ -2.24
PFF1P38244 PRP16YKR086W 3216 nt1.02□□□□□ -2.25
PFF1P38244 YKL145W-AYKL145W-A 93 nt1.02□□□□□ -2.25
PFF1P38244 WAR1YML076C 2835 nt1.02□□□□□ -2.25
PFF1P38244 YNL028WYNL028W 318 nt1.02□□□□□ -2.25
PFF1P38244 HMRA2YCR096C 360 nt1.01□□□□□ -2.25
PFF1P38244 RPS27BYHR021C 249 nt1.01□□□□□ -2.25
PFF1P38244 YLR120W-AYLR120W-A 102 nt1□□□□□ -2.25
PFF1P38244 YOR008C-AYOR008C-A 225 nt1□□□□□ -2.25
PFF1P38244 YOR011W-AYOR011W-A 207 nt1□□□□□ -2.25
PFF1P38244 KAP120YPL125W 3099 nt1□□□□□ -2.25
PFF1P38244 ECM12YHR021W-A 456 nt0.99□□□□□ -2.25
PFF1P38244 YMR172C-AYMR172C-A 384 nt0.99□□□□□ -2.25
PFF1P38244 IES4YOR189W 351 nt0.99□□□□□ -2.25
PFF1P38244 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
PFF1P38244 YGL052WYGL052W 306 nt0.98□□□□□ -2.25
PFF1P38244 YHR063W-AYHR063W-A 336 nt0.98□□□□□ -2.25
PFF1P38244 YJL197C-AYJL197C-A 282 nt0.98□□□□□ -2.25
PFF1P38244 YBR064WYBR064W 429 nt0.98□□□□□ -2.25
PFF1P38244 SMC1YFL008W 3678 nt0.98□□□□□ -2.25
PFF1P38244 YGL041CYGL041C 204 nt0.97□□□□□ -2.25
PFF1P38244 GEA2YEL022W 4380 nt0.96□□□□□ -2.26
PFF1P38244 snR74snR74 88 nt0.95□□□□□ -2.26
PFF1P38244 ISD11YER048W-A 285 nt0.95□□□□□ -2.26
PFF1P38244 SGF11YPL047W 300 nt0.95□□□□□ -2.26
PFF1P38244 YPR092WYPR092W 306 nt0.95□□□□□ -2.26
PFF1P38244 snR49snR49 165 nt0.95□□□□□ -2.26
PFF1P38244 BUD3YCL014W 4911 nt0.94□□□□□ -2.26
PFF1P38244 snR8snR8 190 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)BtT(AGU)B 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)CtT(AGU)C 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)DtT(AGU)D 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)HtT(AGU)H 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)I1tT(AGU)I1 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)I2tT(AGU)I2 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)JtT(AGU)J 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)N1tT(AGU)N1 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)N2tT(AGU)N2 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)O1tT(AGU)O1 73 nt0.94□□□□□ -2.26
PFF1P38244 tT(AGU)O2tT(AGU)O2 73 nt0.94□□□□□ -2.26
PFF1P38244 YDR366CYDR366C 399 nt0.93□□□□□ -2.26
PFF1P38244 CMC4YMR194C-B 222 nt0.93□□□□□ -2.26
PFF1P38244 snR80snR80 171 nt0.92□□□□□ -2.26
PFF1P38244 YDL196WYDL196W 330 nt0.92□□□□□ -2.26
PFF1P38244 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
PFF1P38244 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
PFF1P38244 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
PFF1P38244 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
PFF1P38244 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
PFF1P38244 MCM10YIL150C 1716 nt0.92□□□□□ -2.26
PFF1P38244 YDR354C-AYDR354C-A 144 nt0.91□□□□□ -2.26
PFF1P38244 OLI1Q0130 231 nt0.91□□□□□ -2.26
PFF1P38244 YGL188C-AYGL188C-A 141 nt0.91□□□□□ -2.26
PFF1P38244 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
PFF1P38244 NPR2YEL062W 1848 nt0.9□□□□□ -2.27
PFF1P38244 YLL019W-AYLL019W-A 93 nt0.9□□□□□ -2.27
PFF1P38244 YMR307C-AYMR307C-A 195 nt0.9□□□□□ -2.27
PFF1P38244 snR55snR55 98 nt0.89□□□□□ -2.27
PFF1P38244 ABF2YMR072W 552 nt0.89□□□□□ -2.27
PFF1P38244 YOL155W-AYOL155W-A 135 nt0.89□□□□□ -2.27
PFF1P38244 UTP8YGR128C 2142 nt0.89□□□□□ -2.27
PFF1P38244 tF(GAA)QtF(GAA)Q 75 nt0.88□□□□□ -2.27
PFF1P38244 YNL211CYNL211C 261 nt0.88□□□□□ -2.27
PFF1P38244 TRS65YGR166W 1683 nt0.88□□□□□ -2.27
PFF1P38244 YOR072W-BYOR072W-B 162 nt0.86□□□□□ -2.27
PFF1P38244 YFR012W-AYFR012W-A 87 nt0.85□□□□□ -2.27
PFF1P38244 YJL026C-AYJL026C-A 222 nt0.85□□□□□ -2.27
PFF1P38244 YPL044CYPL044C 549 nt0.85□□□□□ -2.27
PFF1P38244 FMP27YLR454W 7887 nt0.85□□□□□ -2.27
PFF1P38244 YIR030W-AYIR030W-A 384 nt0.84□□□□□ -2.27
PFF1P38244 YMR158W-BYMR158W-B 321 nt0.84□□□□□ -2.27
PFF1P38244 YOR302WYOR302W 78 nt0.84□□□□□ -2.27
PFF1P38244 NOP9YJL010C 2001 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms