Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 NAB6YML117W 3405 nt3.28□□□□□ -1.88
RIM101P33400 ROM2YLR371W 4071 nt3.28□□□□□ -1.88
RIM101P33400 tD(GUC)QtD(GUC)Q 75 nt3.27□□□□□ -1.89
RIM101P33400 BEM3YPL115C 3387 nt3.26□□□□□ -1.89
RIM101P33400 DYN1YKR054C 12279 nt3.26□□□□□ -1.89
RIM101P33400 GIP3YPL137C 3831 nt3.26□□□□□ -1.89
RIM101P33400 YSP2YDR326C 4317 nt3.26□□□□□ -1.89
RIM101P33400 YDL073WYDL073W 2955 nt3.26□□□□□ -1.89
RIM101P33400 YDL159W-AYDL159W-A 132 nt3.25□□□□□ -1.89
RIM101P33400 UTP21YLR409C 2820 nt3.25□□□□□ -1.89
RIM101P33400 NNF2YGR089W 2811 nt3.24□□□□□ -1.89
RIM101P33400 GEA1YJR031C 4227 nt3.24□□□□□ -1.89
RIM101P33400 SKI7YOR076C 2244 nt3.23□□□□□ -1.89
RIM101P33400 ANS1YHR126C 480 nt3.23□□□□□ -1.89
RIM101P33400 RTT101YJL047C 2529 nt3.23□□□□□ -1.89
RIM101P33400 FAR11YNL127W 2862 nt3.22□□□□□ -1.89
RIM101P33400 DRS2YAL026C 4068 nt3.21□□□□□ -1.9
RIM101P33400 HIR3YJR140C 4947 nt3.21□□□□□ -1.9
RIM101P33400 RAD50YNL250W 3939 nt3.21□□□□□ -1.9
RIM101P33400 RPL41AYDL184C 78 nt3.21□□□□□ -1.9
RIM101P33400 YMR122W-AYMR122W-A 255 nt3.21□□□□□ -1.9
RIM101P33400 MGA2YIR033W 3342 nt3.21□□□□□ -1.9
RIM101P33400 BRE1YDL074C 2103 nt3.2□□□□□ -1.9
RIM101P33400 PMR1YGL167C 2853 nt3.2□□□□□ -1.9
RIM101P33400 YIL082W-AYIL082W-A 4497 nt3.19□□□□□ -1.9
RIM101P33400 YJL052C-AYJL052C-A 120 nt3.19□□□□□ -1.9
RIM101P33400 tK(UUU)DtK(UUU)D 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)G1tK(UUU)G1 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)G2tK(UUU)G2 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)KtK(UUU)K 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)LtK(UUU)L 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)OtK(UUU)O 73 nt3.18□□□□□ -1.9
RIM101P33400 tK(UUU)PtK(UUU)P 73 nt3.18□□□□□ -1.9
RIM101P33400 KIP1YBL063W 3336 nt3.17□□□□□ -1.9
RIM101P33400 TDA9YML081W 3756 nt3.16□□□□□ -1.9
RIM101P33400 RAV1YJR033C 4074 nt3.16□□□□□ -1.9
RIM101P33400 SAP1YER047C 2694 nt3.16□□□□□ -1.9
RIM101P33400 SEC7YDR170C 6030 nt3.15□□□□□ -1.9
RIM101P33400 YHR180C-BYHR180C-B 105 nt3.15□□□□□ -1.91
RIM101P33400 YDL159C-BYDL159C-B 177 nt3.14□□□□□ -1.91
RIM101P33400 YHR086W-AYHR086W-A 162 nt3.14□□□□□ -1.91
RIM101P33400 MOT1YPL082C 5604 nt3.14□□□□□ -1.91
RIM101P33400 TOM1YDR457W 9807 nt3.12□□□□□ -1.91
RIM101P33400 TOP2YNL088W 4287 nt3.12□□□□□ -1.91
RIM101P33400 MSH6YDR097C 3729 nt3.12□□□□□ -1.91
RIM101P33400 YGR122C-AYGR122C-A 129 nt3.12□□□□□ -1.91
RIM101P33400 EMC5YIL027C 426 nt3.12□□□□□ -1.91
RIM101P33400 YBR296C-AYBR296C-A 120 nt3.12□□□□□ -1.91
RIM101P33400 TOR1YJR066W 7413 nt3.12□□□□□ -1.91
RIM101P33400 RPA190YOR341W 4995 nt3.1□□□□□ -1.91
RIM101P33400 BNR1YIL159W 4128 nt3.09□□□□□ -1.91
RIM101P33400 SPO14YKR031C 5052 nt3.09□□□□□ -1.92
RIM101P33400 ARP8YOR141C 2646 nt3.08□□□□□ -1.92
RIM101P33400 MSB2YGR014W 3921 nt3.08□□□□□ -1.92
RIM101P33400 YDR098C-BYDR098C-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YDR210C-DYDR210C-D 5268 nt3.08□□□□□ -1.92
RIM101P33400 YDR316W-BYDR316W-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YDR365W-BYDR365W-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YER138CYER138C 5268 nt3.08□□□□□ -1.92
RIM101P33400 YER160CYER160C 5268 nt3.08□□□□□ -1.92
RIM101P33400 YGR038C-BYGR038C-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YGR161C-DYGR161C-D 5268 nt3.08□□□□□ -1.92
RIM101P33400 YJR027WYJR027W 5268 nt3.08□□□□□ -1.92
RIM101P33400 YLR157C-BYLR157C-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YML039WYML039W 5268 nt3.08□□□□□ -1.92
RIM101P33400 YML045WYML045W 5268 nt3.08□□□□□ -1.92
RIM101P33400 YMR050CYMR050C 5268 nt3.08□□□□□ -1.92
RIM101P33400 YOL103W-BYOL103W-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YBR012W-BYBR012W-B 5271 nt3.08□□□□□ -1.92
RIM101P33400 YOR142W-BYOR142W-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YPL257W-BYPL257W-B 5268 nt3.08□□□□□ -1.92
RIM101P33400 YPR158W-BYPR158W-B 5271 nt3.08□□□□□ -1.92
RIM101P33400 MBB1YJL199C 327 nt3.07□□□□□ -1.92
RIM101P33400 YPR160W-AYPR160W-A 81 nt3.07□□□□□ -1.92
RIM101P33400 tF(GAA)DtF(GAA)D 73 nt3.06□□□□□ -1.92
RIM101P33400 tF(GAA)NtF(GAA)N 73 nt3.06□□□□□ -1.92
RIM101P33400 YML054C-AYML054C-A 159 nt3.06□□□□□ -1.92
RIM101P33400 KOG1YHR186C 4674 nt3.06□□□□□ -1.92
RIM101P33400 SRB8YCR081W 4284 nt3.05□□□□□ -1.92
RIM101P33400 PRP16YKR086W 3216 nt3.04□□□□□ -1.92
RIM101P33400 HSL1YKL101W 4557 nt3.04□□□□□ -1.92
RIM101P33400 EST1YLR233C 2100 nt3.04□□□□□ -1.92
RIM101P33400 KRE33YNL132W 3171 nt3.04□□□□□ -1.92
RIM101P33400 YBL005W-BYBL005W-B 5268 nt3.03□□□□□ -1.92
RIM101P33400 AI1Q0050 2505 nt3.02□□□□□ -1.93
RIM101P33400 HER1YOR227W 3741 nt3.02□□□□□ -1.93
RIM101P33400 YOR296WYOR296W 3870 nt3.01□□□□□ -1.93
RIM101P33400 YDR209CYDR209C 414 nt3.01□□□□□ -1.93
RIM101P33400 snR38snR38 95 nt3.01□□□□□ -1.93
RIM101P33400 ESL2YKR096W 3588 nt3□□□□□ -1.93
RIM101P33400 TRA1YHR099W 11235 nt3□□□□□ -1.93
RIM101P33400 tQ(UUG)BtQ(UUG)B 72 nt3□□□□□ -1.93
RIM101P33400 PET127YOR017W 2403 nt3□□□□□ -1.93
RIM101P33400 snR69snR69 101 nt2.99□□□□□ -1.93
RIM101P33400 STH1YIL126W 4080 nt2.98□□□□□ -1.93
RIM101P33400 BPT1YLL015W 4680 nt2.98□□□□□ -1.93
RIM101P33400 SXM1YDR395W 2835 nt2.98□□□□□ -1.93
RIM101P33400 CYR1YJL005W 6081 nt2.98□□□□□ -1.93
RIM101P33400 YLR422WYLR422W 5799 nt2.98□□□□□ -1.93
RIM101P33400 STO1YMR125W 2586 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms