Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 AC007375.3-201ENST00000600936 2314 ntBASIC17.31■□□□□ 0.36
CD40P25942 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.31■□□□□ 0.36
CD40P25942 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.31■□□□□ 0.36
CD40P25942 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 AC133681.1-201ENST00000465482 601 ntBASIC17.31■□□□□ 0.36
CD40P25942 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.31■□□□□ 0.36
CD40P25942 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.31■□□□□ 0.36
CD40P25942 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.31■□□□□ 0.36
CD40P25942 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CD40P25942 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD40P25942 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD40P25942 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.3■□□□□ 0.36
CD40P25942 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.3■□□□□ 0.36
CD40P25942 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.3■□□□□ 0.36
CD40P25942 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 DPP3P2-201ENST00000416030 1696 ntBASIC17.3■□□□□ 0.36
CD40P25942 AC092720.2-201ENST00000602388 1665 ntBASIC17.3■□□□□ 0.36
CD40P25942 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 KRASP1-201ENST00000407852 552 ntBASIC17.3■□□□□ 0.36
CD40P25942 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.3■□□□□ 0.36
CD40P25942 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.3■□□□□ 0.36
CD40P25942 AL121829.2-201ENST00000620908 328 ntBASIC17.3■□□□□ 0.36
CD40P25942 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 AC124283.5-201ENST00000624661 1809 ntBASIC17.3■□□□□ 0.36
CD40P25942 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD40P25942 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.3■□□□□ 0.36
CD40P25942 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.3■□□□□ 0.36
CD40P25942 KRT8P17-201ENST00000453110 1448 ntBASIC17.3■□□□□ 0.36
CD40P25942 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD40P25942 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.29■□□□□ 0.36
CD40P25942 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.29■□□□□ 0.36
CD40P25942 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.29■□□□□ 0.36
CD40P25942 AC110285.5-201ENST00000611501 352 ntBASIC17.29■□□□□ 0.36
CD40P25942 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD40P25942 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.29■□□□□ 0.36
CD40P25942 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.29■□□□□ 0.36
CD40P25942 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
CD40P25942 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD40P25942 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.28■□□□□ 0.36
CD40P25942 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
CD40P25942 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 MIR718-201ENST00000390190 70 ntBASIC17.28■□□□□ 0.36
CD40P25942 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 AL121906.2-201ENST00000621597 723 ntBASIC17.28■□□□□ 0.36
CD40P25942 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CD40P25942 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD40P25942 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
CD40P25942 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD40P25942 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
CD40P25942 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.27■□□□□ 0.36
CD40P25942 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.27■□□□□ 0.36
CD40P25942 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CD40P25942 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CD40P25942 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.27■□□□□ 0.36
CD40P25942 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms