Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeastyeast

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC53P25441 ASE1YOR058C 2658 nt0.78□□□□□ -2.28
RPC53P25441 YPL038W-AYPL038W-A 192 nt0.78□□□□□ -2.28
RPC53P25441 YMR160WYMR160W 2451 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)BtF(GAA)B 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)FtF(GAA)F 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)GtF(GAA)G 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)H1tF(GAA)H1 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)H2tF(GAA)H2 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)MtF(GAA)M 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)P1tF(GAA)P1 73 nt0.77□□□□□ -2.29
RPC53P25441 tF(GAA)P2tF(GAA)P2 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
RPC53P25441 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
RPC53P25441 YNL211CYNL211C 261 nt0.77□□□□□ -2.29
RPC53P25441 YPR197CYPR197C 564 nt0.77□□□□□ -2.29
RPC53P25441 UTP20YBL004W 7482 nt0.77□□□□□ -2.29
RPC53P25441 SSS1YDR086C 243 nt0.76□□□□□ -2.29
RPC53P25441 SGF11YPL047W 300 nt0.76□□□□□ -2.29
RPC53P25441 YOR218CYOR218C 420 nt0.75□□□□□ -2.29
RPC53P25441 CSE2YNR010W 450 nt0.74□□□□□ -2.29
RPC53P25441 CHS6YJL099W 2241 nt0.74□□□□□ -2.29
RPC53P25441 SEC8YPR055W 3198 nt0.74□□□□□ -2.29
RPC53P25441 PAU12YGR294W 363 nt0.73□□□□□ -2.29
RPC53P25441 RPS27BYHR021C 249 nt0.72□□□□□ -2.29
RPC53P25441 YIL115W-AYIL115W-A 372 nt0.71□□□□□ -2.3
RPC53P25441 YDR102CYDR102C 333 nt0.7□□□□□ -2.3
RPC53P25441 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
RPC53P25441 YML002WYML002W 2214 nt0.69□□□□□ -2.3
RPC53P25441 COG8YML071C 1824 nt0.69□□□□□ -2.3
RPC53P25441 HTL1YCR020W-B 237 nt0.69□□□□□ -2.3
RPC53P25441 YMR031W-AYMR031W-A 327 nt0.69□□□□□ -2.3
RPC53P25441 YAF9YNL107W 681 nt0.69□□□□□ -2.3
RPC53P25441 YLR399W-AYLR399W-A 105 nt0.68□□□□□ -2.3
RPC53P25441 YFR012W-AYFR012W-A 87 nt0.67□□□□□ -2.3
RPC53P25441 COX5BYIL111W 456 nt0.67□□□□□ -2.3
RPC53P25441 YAL067W-AYAL067W-A 228 nt0.67□□□□□ -2.3
RPC53P25441 YPR160W-AYPR160W-A 81 nt0.67□□□□□ -2.3
RPC53P25441 YCR018C-AYCR018C-A 255 nt0.66□□□□□ -2.3
RPC53P25441 QCR9YGR183C 201 nt0.66□□□□□ -2.3
RPC53P25441 YMR307C-AYMR307C-A 195 nt0.66□□□□□ -2.3
RPC53P25441 YSP1YHR155W 3687 nt0.66□□□□□ -2.3
RPC53P25441 FYV10YIL097W 1551 nt0.66□□□□□ -2.3
RPC53P25441 VIK1YPL253C 1944 nt0.66□□□□□ -2.3
RPC53P25441 YDL240C-AYDL240C-A 138 nt0.65□□□□□ -2.31
RPC53P25441 YDR183C-AYDR183C-A 258 nt0.65□□□□□ -2.31
RPC53P25441 snR60snR60 104 nt0.64□□□□□ -2.31
RPC53P25441 YGL149WYGL149W 306 nt0.64□□□□□ -2.31
RPC53P25441 YIL032CYIL032C 357 nt0.63□□□□□ -2.31
RPC53P25441 snR190snR190 190 nt0.63□□□□□ -2.31
RPC53P25441 BEM3YPL115C 3387 nt0.62□□□□□ -2.31
RPC53P25441 YJL127W-AYJL127W-A 117 nt0.62□□□□□ -2.31
RPC53P25441 snR36snR36 182 nt0.62□□□□□ -2.31
RPC53P25441 HAL9YOL089C 3093 nt0.62□□□□□ -2.31
RPC53P25441 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
RPC53P25441 YKL145W-AYKL145W-A 93 nt0.61□□□□□ -2.31
RPC53P25441 YDR354C-AYDR354C-A 144 nt0.6□□□□□ -2.31
RPC53P25441 ATP6Q0085 780 nt0.6□□□□□ -2.31
RPC53P25441 YIL134C-AYIL134C-A 204 nt0.6□□□□□ -2.31
RPC53P25441 YOL014WYOL014W 375 nt0.6□□□□□ -2.31
RPC53P25441 MLP1YKR095W 5628 nt0.59□□□□□ -2.32
RPC53P25441 YDL185C-AYDL185C-A 228 nt0.58□□□□□ -2.32
RPC53P25441 YKL136WYKL136W 399 nt0.58□□□□□ -2.32
RPC53P25441 PRP5YBR237W 2550 nt0.58□□□□□ -2.32
RPC53P25441 PET111YMR257C 2403 nt0.57□□□□□ -2.32
RPC53P25441 YMR193C-AYMR193C-A 387 nt0.57□□□□□ -2.32
RPC53P25441 ULP2YIL031W 3105 nt0.57□□□□□ -2.32
RPC53P25441 PRP42YDR235W 1635 nt0.56□□□□□ -2.32
RPC53P25441 OST4YDL232W 111 nt0.56□□□□□ -2.32
RPC53P25441 GIM4YEL003W 336 nt0.56□□□□□ -2.32
RPC53P25441 YFL063WYFL063W 456 nt0.56□□□□□ -2.32
RPC53P25441 YJL026C-AYJL026C-A 222 nt0.56□□□□□ -2.32
RPC53P25441 YNL028WYNL028W 318 nt0.56□□□□□ -2.32
RPC53P25441 YEL020C-BYEL020C-B 198 nt0.55□□□□□ -2.32
RPC53P25441 YJL197C-AYJL197C-A 282 nt0.54□□□□□ -2.32
RPC53P25441 YHR175W-AYHR175W-A 150 nt0.53□□□□□ -2.32
RPC53P25441 RPL39YJL189W 156 nt0.53□□□□□ -2.32
RPC53P25441 YKL118WYKL118W 312 nt0.53□□□□□ -2.32
RPC53P25441 YLR282CYLR282C 342 nt0.53□□□□□ -2.32
RPC53P25441 YFL032WYFL032W 321 nt0.52□□□□□ -2.33
RPC53P25441 YKL100W-AYKL100W-A 90 nt0.52□□□□□ -2.33
RPC53P25441 FMP27YLR454W 7887 nt0.52□□□□□ -2.33
RPC53P25441 snR56snR56 88 nt0.51□□□□□ -2.33
RPC53P25441 HMRA1YCR097W 381 nt0.51□□□□□ -2.33
RPC53P25441 COY1YKL179C 2040 nt0.49□□□□□ -2.33
RPC53P25441 TRS65YGR166W 1683 nt0.49□□□□□ -2.33
RPC53P25441 BLI1YKL061W 342 nt0.48□□□□□ -2.33
RPC53P25441 YDR413CYDR413C 576 nt0.47□□□□□ -2.33
RPC53P25441 SBH1YER087C-B 249 nt0.47□□□□□ -2.33
RPC53P25441 YOR072W-BYOR072W-B 162 nt0.47□□□□□ -2.33
RPC53P25441 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
RPC53P25441 YGL123C-AYGL123C-A 231 nt0.46□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms